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The map label for this gene is uvsE [H]

Identifier: 118480381

GI number: 118480381

Start: 5105624

End: 5106643

Strand: Direct

Name: uvsE [H]

Synonym: BALH_4846

Alternate gene names: 118480381

Gene position: 5105624-5106643 (Clockwise)

Preceding gene: 118480380

Following gene: 118480382

Centisome position: 97.12

GC content: 34.12

Gene sequence:

>1020_bases
ATGGATAGGAACAATACTCGCTTTCTTCCTATAGGAAAGATAATGCATAAAGGATGTGTATTCATTATGATTATGCGGTT
CGGATATGTCTCACATGCAATGGCACTCTGGGACTGCTCTCCGGCTAAAACGATAACATTTACAAGCTTTCAAAAGCTCA
GTAAACAAGAGCGAGAAGATAAATTATACGATGTTACAAAACAAAATCTTGAGCATACAATACGTATTCTCCATTACAAT
ATAGCTCATGAAATTCCGTTATATCGCTTGTCTTCTTCCATCGTCCCACTTGCAACACATCCCGAAGTCGAGTTTGATTA
TATCGGGGCATTTACACCGCTTTGGCGTAAAATTGGGGCATTAATTAAAGAACATAATTTAAGAGTAAGTTTTCATCCAA
ATCAATTTACACTATTTACAAGCGACAAACCACATATTACGACTAACGCTATTACAGATATGACCTATCATTATAAAGTA
TTAGATGCAATAGGCATTGCAGATTCTTCTTATATTAACATCCATGTAGGTGGGGCCTACGGAAATAAAGAAAAAGCAAT
CGAGCGTTTCCATGAAAACATAAAAAAACTTCCTGCACATATAAAAAAACAAATGACACTTGAAAATGATGATAAAACAT
ATACAACTGCTGAAACGTTATCTATTTGCCAAAAAGAAAAGATCCCATTCGTATTTGATTATCACCATCACATGGCAAAT
CTTTGCGAGGAACCGTTAGAAGAGTTACTTCCTGCAATTTTTGAAACTTGGTCACATACAAATATCGTTCCTAAAGTTCA
CATTTCCTCTCCTAAATCAAAAAAAGAATTTAGGGCTCACGCGGAATATATTGATTTAGAGTTTATTAAACCTTTCTTAC
ACGTTGCAAAAAAAATCAATCATAATTTCGATATTATGATTGAAAGTAAACAGAAAGATTTAGCGATGCTGCAATTCATA
CAGGAATTATCCTCTATAAGAGGGATAAAAAGAATAAGTAGCTCAACATTACAATGGTAA

Upstream 100 bases:

>100_bases
TACAAACAGTAAGAAACAAATTCCATAAGGATCTAGGAAACGCATCATTACTTTCCTTTAAAGATGTTAGCCCGCATTCT
CTTATTGATAGAGGAAAAGA

Downstream 100 bases:

>100_bases
ATTGTAATGTTGAGCTATTTTTTTCAAAAAAAGTAATTTTTTTAGTAAAAAACACCCTATTTTATATGCTATGATTGGAA
TTAGCATTTTCCACCTGTGA

Product: putative UV damage endonuclease

Products: NA

Alternate protein names: UV-endonuclease; UVED [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MDRNNTRFLPIGKIMHKGCVFIMIMRFGYVSHAMALWDCSPAKTITFTSFQKLSKQEREDKLYDVTKQNLEHTIRILHYN
IAHEIPLYRLSSSIVPLATHPEVEFDYIGAFTPLWRKIGALIKEHNLRVSFHPNQFTLFTSDKPHITTNAITDMTYHYKV
LDAIGIADSSYINIHVGGAYGNKEKAIERFHENIKKLPAHIKKQMTLENDDKTYTTAETLSICQKEKIPFVFDYHHHMAN
LCEEPLEELLPAIFETWSHTNIVPKVHISSPKSKKEFRAHAEYIDLEFIKPFLHVAKKINHNFDIMIESKQKDLAMLQFI
QELSSIRGIKRISSSTLQW

Sequences:

>Translated_339_residues
MDRNNTRFLPIGKIMHKGCVFIMIMRFGYVSHAMALWDCSPAKTITFTSFQKLSKQEREDKLYDVTKQNLEHTIRILHYN
IAHEIPLYRLSSSIVPLATHPEVEFDYIGAFTPLWRKIGALIKEHNLRVSFHPNQFTLFTSDKPHITTNAITDMTYHYKV
LDAIGIADSSYINIHVGGAYGNKEKAIERFHENIKKLPAHIKKQMTLENDDKTYTTAETLSICQKEKIPFVFDYHHHMAN
LCEEPLEELLPAIFETWSHTNIVPKVHISSPKSKKEFRAHAEYIDLEFIKPFLHVAKKINHNFDIMIESKQKDLAMLQFI
QELSSIRGIKRISSSTLQW
>Mature_339_residues
MDRNNTRFLPIGKIMHKGCVFIMIMRFGYVSHAMALWDCSPAKTITFTSFQKLSKQEREDKLYDVTKQNLEHTIRILHYN
IAHEIPLYRLSSSIVPLATHPEVEFDYIGAFTPLWRKIGALIKEHNLRVSFHPNQFTLFTSDKPHITTNAITDMTYHYKV
LDAIGIADSSYINIHVGGAYGNKEKAIERFHENIKKLPAHIKKQMTLENDDKTYTTAETLSICQKEKIPFVFDYHHHMAN
LCEEPLEELLPAIFETWSHTNIVPKVHISSPKSKKEFRAHAEYIDLEFIKPFLHVAKKINHNFDIMIESKQKDLAMLQFI
QELSSIRGIKRISSSTLQW

Specific function: Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion [H]

COG id: COG4294

COG function: function code L; UV damage repair endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uve1/uvsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004601
- InterPro:   IPR013022 [H]

Pfam domain/function: PF03851 UvdE [H]

EC number: NA

Molecular weight: Translated: 39438; Mature: 39438

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRNNTRFLPIGKIMHKGCVFIMIMRFGYVSHAMALWDCSPAKTITFTSFQKLSKQERED
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH
KLYDVTKQNLEHTIRILHYNIAHEIPLYRLSSSIVPLATHPEVEFDYIGAFTPLWRKIGA
HHHHHHHHHHHHHHHHHEEHHHHCCCHHHHCCCCEEEECCCCCCCHHHCCHHHHHHHHHH
LIKEHNLRVSFHPNQFTLFTSDKPHITTNAITDMTYHYKVLDAIGIADSSYINIHVGGAY
HHHHCCEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
GNKEKAIERFHENIKKLPAHIKKQMTLENDDKTYTTAETLSICQKEKIPFVFDYHHHMAN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCEEEEHHHHHHH
LCEEPLEELLPAIFETWSHTNIVPKVHISSPKSKKEFRAHAEYIDLEFIKPFLHVAKKIN
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HNFDIMIESKQKDLAMLQFIQELSSIRGIKRISSSTLQW
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRNNTRFLPIGKIMHKGCVFIMIMRFGYVSHAMALWDCSPAKTITFTSFQKLSKQERED
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH
KLYDVTKQNLEHTIRILHYNIAHEIPLYRLSSSIVPLATHPEVEFDYIGAFTPLWRKIGA
HHHHHHHHHHHHHHHHHEEHHHHCCCHHHHCCCCEEEECCCCCCCHHHCCHHHHHHHHHH
LIKEHNLRVSFHPNQFTLFTSDKPHITTNAITDMTYHYKVLDAIGIADSSYINIHVGGAY
HHHHCCEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
GNKEKAIERFHENIKKLPAHIKKQMTLENDDKTYTTAETLSICQKEKIPFVFDYHHHMAN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCEEEEHHHHHHH
LCEEPLEELLPAIFETWSHTNIVPKVHISSPKSKKEFRAHAEYIDLEFIKPFLHVAKKIN
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HNFDIMIESKQKDLAMLQFIQELSSIRGIKRISSSTLQW
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA