Click here to switch to the map view.

The map label for this gene is wcaL [C]

Identifier: 118480314

GI number: 118480314

Start: 5032282

End: 5033463

Strand: Reverse

Name: wcaL [C]

Synonym: BALH_4775

Alternate gene names: 118480314

Gene position: 5033463-5032282 (Counterclockwise)

Preceding gene: 118480315

Following gene: 118480313

Centisome position: 95.75

GC content: 29.27

Gene sequence:

>1182_bases
GTGTTAAGAATGAAAAAAATATTAATTGTTAATAGCTATTATGCACCTACTATTGTAGGTGGAGCGGAAGTTTCTACTCA
ATTATTGGCAGAGGGCTTAACCAAACATTATCAAGTTTATGTTTTAACAACTGGATCGCAAAAATCAGGTATACAAAAGG
AAGAAAAAAATGGGGTTAAAATTTATCGTATTCCATGTATGAATCTATATTGGCCTGCTGAGCAAAGGGATAGAAGTAAT
CTAATGAAATTAGGTTGGCATTTTATAAATACCTTTAATATAAAACAATACAAGTTGCTAAAAAAGTTATTAGTTGAGAT
TAGACCAGATATTATGCACACACAGAATTTGAATGGAGTTGGAACTTATATTTGGGGAATTGCTAAACAATTAAATATCC
CTACAGTTCATACAACAAGAGATTATGCATTGTTTGAACCTGTGAATAATAAATTTGTTAATAAGATATTATTATATTTT
AATCGGGCACGGAGTAAGCATGTTAAGTGTGTTGTAGGTATCTCTGAATTTATTTTAGACAAACATAAGGGACAAGGATT
ATTTCCAAATGCTAAAGAAAATATAGTTCATAATGTAGTTAAAGCAAACAGATATAAGAGAAAACAGAGAAAAAAAGGAG
AACCCTTAATAATTGGTTATTTTGGACAATTAGTTGATATAAAAGGTGTACATATATTGATACAAGCTGTTCAATCTTTA
GGGGATAATATAATAGATAAACTAATTATATGTGGATCTGGACCATTAGAAAAACAAATACAGGAAGTAGCAGAAATAGA
CGATAGAATTGTTTTTAGAGGAAAGGTTCCCCTAGAAGAAGTAAACAAGCAAATGGCTCAAGTAGATTTAACTGTTGTCC
CATCTATATGGGAGGAACCTTTTGGAAGGATAATTATAGAATCTTATAATCAAGGAACACCAGTCATAGCTACTAAAGTA
GGGGGGATTCCTGAATTAGTAATTAATAAAGATTTTTTAGTTACTAAGGGAGATATTGAGCAATTAATGAAATCTATTGA
GATGTTCTTTTATTTAGACGATGATCAAATAAATAAAAATATAAATGATAGCCTTAGTGAATCGATGCGTTATCATGATA
ATATTCATTTGTATAATGTAATATATAAAAATTTATATAATGGTGATAAATTTGATGGATAA

Upstream 100 bases:

>100_bases
ATCTCTAAGATATTATTAGGAATGATATCTTATGGAGGGTCCATTTATATTTTTAACAAGAATGAAATAGAAGGTTTATT
ATATAAAATAAAATTCAAAG

Downstream 100 bases:

>100_bases
AGCGATGTTCCTAGATACACTTATCTTTTTAGGGATAAATATAATATTTATATTTTTTATTGCTAAAAAGAACATAAATA
TTAAATCAAAAATAGTATAT

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: ORF8 [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MLRMKKILIVNSYYAPTIVGGAEVSTQLLAEGLTKHYQVYVLTTGSQKSGIQKEEKNGVKIYRIPCMNLYWPAEQRDRSN
LMKLGWHFINTFNIKQYKLLKKLLVEIRPDIMHTQNLNGVGTYIWGIAKQLNIPTVHTTRDYALFEPVNNKFVNKILLYF
NRARSKHVKCVVGISEFILDKHKGQGLFPNAKENIVHNVVKANRYKRKQRKKGEPLIIGYFGQLVDIKGVHILIQAVQSL
GDNIIDKLIICGSGPLEKQIQEVAEIDDRIVFRGKVPLEEVNKQMAQVDLTVVPSIWEEPFGRIIIESYNQGTPVIATKV
GGIPELVINKDFLVTKGDIEQLMKSIEMFFYLDDDQINKNINDSLSESMRYHDNIHLYNVIYKNLYNGDKFDG

Sequences:

>Translated_393_residues
MLRMKKILIVNSYYAPTIVGGAEVSTQLLAEGLTKHYQVYVLTTGSQKSGIQKEEKNGVKIYRIPCMNLYWPAEQRDRSN
LMKLGWHFINTFNIKQYKLLKKLLVEIRPDIMHTQNLNGVGTYIWGIAKQLNIPTVHTTRDYALFEPVNNKFVNKILLYF
NRARSKHVKCVVGISEFILDKHKGQGLFPNAKENIVHNVVKANRYKRKQRKKGEPLIIGYFGQLVDIKGVHILIQAVQSL
GDNIIDKLIICGSGPLEKQIQEVAEIDDRIVFRGKVPLEEVNKQMAQVDLTVVPSIWEEPFGRIIIESYNQGTPVIATKV
GGIPELVINKDFLVTKGDIEQLMKSIEMFFYLDDDQINKNINDSLSESMRYHDNIHLYNVIYKNLYNGDKFDG
>Mature_393_residues
MLRMKKILIVNSYYAPTIVGGAEVSTQLLAEGLTKHYQVYVLTTGSQKSGIQKEEKNGVKIYRIPCMNLYWPAEQRDRSN
LMKLGWHFINTFNIKQYKLLKKLLVEIRPDIMHTQNLNGVGTYIWGIAKQLNIPTVHTTRDYALFEPVNNKFVNKILLYF
NRARSKHVKCVVGISEFILDKHKGQGLFPNAKENIVHNVVKANRYKRKQRKKGEPLIIGYFGQLVDIKGVHILIQAVQSL
GDNIIDKLIICGSGPLEKQIQEVAEIDDRIVFRGKVPLEEVNKQMAQVDLTVVPSIWEEPFGRIIIESYNQGTPVIATKV
GGIPELVINKDFLVTKGDIEQLMKSIEMFFYLDDDQINKNINDSLSESMRYHDNIHLYNVIYKNLYNGDKFDG

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11863130, Length=352, Percent_Identity=22.7272727272727, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17532709, Length=355, Percent_Identity=23.0985915492958, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=338, Percent_Identity=23.6686390532544, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 45082; Mature: 45082

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMKKILIVNSYYAPTIVGGAEVSTQLLAEGLTKHYQVYVLTTGSQKSGIQKEEKNGVK
CCCEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCCCE
IYRIPCMNLYWPAEQRDRSNLMKLGWHFINTFNIKQYKLLKKLLVEIRPDIMHTQNLNGV
EEEEECCCEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHCCCCCCH
GTYIWGIAKQLNIPTVHTTRDYALFEPVNNKFVNKILLYFNRARSKHVKCVVGISEFILD
HHHHHHHHHHCCCCEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHH
KHKGQGLFPNAKENIVHNVVKANRYKRKQRKKGEPLIIGYFGQLVDIKGVHILIQAVQSL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCHHHHHHHHHHHH
GDNIIDKLIICGSGPLEKQIQEVAEIDDRIVFRGKVPLEEVNKQMAQVDLTVVPSIWEEP
HHHHHHHEEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEEEECCHHHHCC
FGRIIIESYNQGTPVIATKVGGIPELVINKDFLVTKGDIEQLMKSIEMFFYLDDDQINKN
CCEEEEECCCCCCCEEEEECCCCCEEEECCCEEEECHHHHHHHHHHHEEEEECCHHHCCC
INDSLSESMRYHDNIHLYNVIYKNLYNGDKFDG
CCHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLRMKKILIVNSYYAPTIVGGAEVSTQLLAEGLTKHYQVYVLTTGSQKSGIQKEEKNGVK
CCCEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCCCE
IYRIPCMNLYWPAEQRDRSNLMKLGWHFINTFNIKQYKLLKKLLVEIRPDIMHTQNLNGV
EEEEECCCEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHCCCCCCH
GTYIWGIAKQLNIPTVHTTRDYALFEPVNNKFVNKILLYFNRARSKHVKCVVGISEFILD
HHHHHHHHHHCCCCEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHH
KHKGQGLFPNAKENIVHNVVKANRYKRKQRKKGEPLIIGYFGQLVDIKGVHILIQAVQSL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCHHHHHHHHHHHH
GDNIIDKLIICGSGPLEKQIQEVAEIDDRIVFRGKVPLEEVNKQMAQVDLTVVPSIWEEP
HHHHHHHEEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEEEECCHHHHCC
FGRIIIESYNQGTPVIATKVGGIPELVINKDFLVTKGDIEQLMKSIEMFFYLDDDQINKN
CCEEEEECCCCCCCEEEEECCCCCEEEECCCEEEECHHHHHHHHHHHEEEEECCHHHCCC
INDSLSESMRYHDNIHLYNVIYKNLYNGDKFDG
CCHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]