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The map label for this gene is yknZ [H]

Identifier: 118480292

GI number: 118480292

Start: 5006854

End: 5008062

Strand: Reverse

Name: yknZ [H]

Synonym: BALH_4753

Alternate gene names: 118480292

Gene position: 5008062-5006854 (Counterclockwise)

Preceding gene: 118480293

Following gene: 118480291

Centisome position: 95.26

GC content: 37.3

Gene sequence:

>1209_bases
GTGTGCGGTATGAGTTTACTAGATAGTATAAAAATTGCCCTCTCTTCTATTTTAGCTCATAAACTGCGTTCAGCTCTTAC
GATGCTAGGTATTATTATCGGTGTTGGTTCGATTATTACTGTCGTTGCAATTGGGCAAGGCGGGGAAGCGATGCTGAAGT
CAAAAATCGCAGGTTCTGGTAATAACCTTATGCCAATTCAGTTTAAACCAGATATTAATGATGAGTTTGCTATAGGTGGA
TTTGAAATACCGAAGTTAACGGAAGAAGATATTATGGAAGTAAAACAAGTGAAAGATGTTTCACATGTTATTACGACAAA
CCAGACGACAGAGGTGCTTGATGTAAATGATAAAAAAGCAAATCTGAATGTTATTGGTCTTGATAATGAATATTTTGCAG
TTAATAAAGTAAAGGTCGTAAAGGGACGTACTTTAAACGAATCAGATATTTCTCATGCAAATAACGTTGTGATGATTAGT
ACAAAGACAGAGGAAACGTTATTTAAGGACGTGAATCCAGTCGGACAAATTATTGAGATGAAAGGACAACCGATGCAAAT
TATCGGTGTGTATACATCTGATAATGAGTTTATGGGATTTGAAATGGAAGAAGGGTTAATTCCGATTACGTTATGGCCTG
TTTTATACGGAACAGATGAAATTCAAAGTATCGCAATTCAATCTAAAAATGTAGACGATTTAGAATCAGCAGGGAAACAA
GCTGTTGATGTACTAAATAGTCGTAAGCCAAGTGAAATTCCAGGTAAATATGAATTAGTAAACTTGAAAGAATTCCAAGA
AGGAGTTTCTAAAGTTACTAACATTATGACGATGATCATTGGTGGTATCGCGGGTATTTCACTAGTCGTTGGTGGTATTG
GCGTTATGAATATTATGCTCGTATCTGTAACGGAGCGTACGCGCGAAATTGGGATACGTAAAGCACTTGGGGCAACGCGT
AGTAAAATTTTATTACAGTTTTTAATTGAAGCAGTTATGTTAACGCTTCTAGGTGGTTTGATCGGAATTGGTCTTGGATA
TGGCGGAGCATATATCGTTTCCACATTCGCAAAATGGCCACCACTCGTTTCATGGGAAGTTGTCGTTGGAGGCGTACTGT
TCTCTATGACACTCGGTATTATCTTTGGATTAATTCCAGCAAACAAAGCTGCGAAATTAGATCCAATTGAAGCACTTCGT
TATGAGTAA

Upstream 100 bases:

>100_bases
AAGGCACGACGATTGTTATGGTTACGCATGAAGAGGAAGTAGCAGCGTATTCTTCCCGCCGCATCGTACTGCGAGACGGG
AAAATTACAGAAGATAGAAG

Downstream 100 bases:

>100_bases
GTAATCGTGTAGTAGAACTACACACTACCGTTCTAGTGGGCGGTTCGTAGCCTTTATATGAGGAAGTGAACCGCCCGTTA
GAACGGGTTATATAAATGGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MCGMSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNLMPIQFKPDINDEFAIGG
FEIPKLTEEDIMEVKQVKDVSHVITTNQTTEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMIS
TKTEETLFKDVNPVGQIIEMKGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQ
AVDVLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATR
SKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALR
YE

Sequences:

>Translated_402_residues
MCGMSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNLMPIQFKPDINDEFAIGG
FEIPKLTEEDIMEVKQVKDVSHVITTNQTTEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMIS
TKTEETLFKDVNPVGQIIEMKGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQ
AVDVLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATR
SKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALR
YE
>Mature_402_residues
MCGMSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNLMPIQFKPDINDEFAIGG
FEIPKLTEEDIMEVKQVKDVSHVITTNQTTEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMIS
TKTEETLFKDVNPVGQIIEMKGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQ
AVDVLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATR
SKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALR
YE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=410, Percent_Identity=32.4390243902439, Blast_Score=171, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43354; Mature: 43354

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGMSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCC
NNLMPIQFKPDINDEFAIGGFEIPKLTEEDIMEVKQVKDVSHVITTNQTTEVLDVNDKKA
CCEEEEEECCCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
NLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMISTKTEETLFKDVNPVGQIIEM
CEEEEECCCCEEEEEEEEEEECCCCCHHHHCCCCCEEEEEECCHHHHHHCCCHHHHHHHC
KGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQ
CCCCEEEEEEEECCCCEECEECCCCEEEEEEHHHHCCCHHHHHHHCCCCCCHHHHHHHHH
AVDVLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIML
HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVTERTREIGIRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MCGMSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCC
NNLMPIQFKPDINDEFAIGGFEIPKLTEEDIMEVKQVKDVSHVITTNQTTEVLDVNDKKA
CCEEEEEECCCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
NLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMISTKTEETLFKDVNPVGQIIEM
CEEEEECCCCEEEEEEEEEEECCCCCHHHHCCCCCEEEEEECCHHHHHHCCCHHHHHHHC
KGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQ
CCCCEEEEEEEECCCCEECEECCCCEEEEEEHHHHCCCHHHHHHHCCCCCCHHHHHHHHH
AVDVLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIML
HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVTERTREIGIRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]