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The map label for this gene is yocH [H]

Identifier: 118480278

GI number: 118480278

Start: 4992840

End: 4993787

Strand: Direct

Name: yocH [H]

Synonym: BALH_4738

Alternate gene names: 118480278

Gene position: 4992840-4993787 (Clockwise)

Preceding gene: 118480276

Following gene: 118480279

Centisome position: 94.97

GC content: 41.24

Gene sequence:

>948_bases
TTGTGTGTTTTCCCGAAATCCGAAAAAATCTGTTGCTATAATGAGGACACGAAAACAAACGCAATGGAGGCTATCATGAA
AAAATTAATTGGAATAGCAACAGCAGCAGTTTTTGGTCTTGGGATTTTCACATCATCTGCTAATGCAGAAACTGTTGTAA
CAACAGACGTACTAAATGTACGCGAAAACCCTACTACTGAATCAAAAGTTGTCGGTAAATTACTAAACGGTAATAAAATA
GATGTTCAAAATACAGAGAACGGATGGTCAAAAATCACTTTAGATGGTAAAGACGCATTCGTAAGTGCAGAGTTCACAAA
AAGCATCTACTACGTAACAGCTAACGTATTAAACGTACGTGCTGAAGCGAACACAGACTCAGAAATCCTTGGAACGTTGA
AGAAAGATGATATGATCGAAACAACGAACCAAGTACAAAATGAATGGTTACAATTTGAATATAACGGGAAAACAGCTTAC
GTTCACGTTCCTTTCTTAACAGGTACAGCACCTGTTATTGAGAAACAAGAACAACCTGCTCCTGCTAAAGCTGTAGCGCC
AGCTAAAGCACCTGCAGCACAAGCAAAACAAGCTGCTAAGCCTGCTGTAAAAGCTGCTAACACTAGCGCACCTGCTGGTG
GTCGTGAGTTAACAGTTGTAGCTACAGCATATACAGCTCATCCGAGCGAAAACGGTGGCACATACGGCGGCCGTGTATTA
ACTGCAATGGGTCATGACTTAACAGCGAACCCAAACATGAAGATGATCGCTGTTGACCCGAAAGTAATCCCATTAGGTTC
TAAAGTATGGGTAGAAGGTTACGGAGAAGCTATCGCTGGAGATACTGGCGGTGCAATTAAAGGTAACCGTATCGACATCC
TACTTGGCTCAGATAGCGCCGCTAAAAAATGGGGACGCAAAACTGTTAAAGTGAAAATTTTAAAATAA

Upstream 100 bases:

>100_bases
ATATAAGTAGAAACCTACTAATCGTATAGAGTGAAAAACGCTTTCCTATATTTTTTGTTATATTACAGCATGTTAACGAC
TTATTACGAATGGTTTGTAA

Downstream 100 bases:

>100_bases
CCAATGACTGCTAAAGCCGGTTCTCTTTGTTGAGAGCTGGCTTTTATTTTTTTATAATAGTTATAAGGAGGCTATGCTCA
TGAATGTACAAGCAAAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MCVFPKSEKICCYNEDTKTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKI
DVQNTENGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAY
VHVPFLTGTAPVIEKQEQPAPAKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVL
TAMGHDLTANPNMKMIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAKKWGRKTVKVKILK

Sequences:

>Translated_315_residues
MCVFPKSEKICCYNEDTKTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKI
DVQNTENGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAY
VHVPFLTGTAPVIEKQEQPAPAKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVL
TAMGHDLTANPNMKMIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAKKWGRKTVKVKILK
>Mature_315_residues
MCVFPKSEKICCYNEDTKTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKI
DVQNTENGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAY
VHVPFLTGTAPVIEKQEQPAPAKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVL
TAMGHDLTANPNMKMIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAKKWGRKTVKVKILK

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 33447; Mature: 33447

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVFPKSEKICCYNEDTKTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNV
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEC
RENPTTESKVVGKLLNGNKIDVQNTENGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVR
CCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCEEEEHHHHCEEEEEEEEEEEEE
AEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQEQPA
ECCCCCHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCEEEEEEEEECCCCHHHCCCCCCC
PAKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVL
CCHHCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEE
TAMGHDLTANPNMKMIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSA
EEECCCEECCCCEEEEEECCEEEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCHH
AKKWGRKTVKVKILK
HHHCCCEEEEEEEEC
>Mature Secondary Structure
MCVFPKSEKICCYNEDTKTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNV
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEC
RENPTTESKVVGKLLNGNKIDVQNTENGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVR
CCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCEEEEHHHHCEEEEEEEEEEEEE
AEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQEQPA
ECCCCCHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCEEEEEEEEECCCCHHHCCCCCCC
PAKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVL
CCHHCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEE
TAMGHDLTANPNMKMIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSA
EEECCCEECCCCEEEEEECCEEEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCHH
AKKWGRKTVKVKILK
HHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]