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The map label for this gene is yvcD [H]

Identifier: 118480195

GI number: 118480195

Start: 4891620

End: 4893206

Strand: Reverse

Name: yvcD [H]

Synonym: BALH_4651

Alternate gene names: 118480195

Gene position: 4893206-4891620 (Counterclockwise)

Preceding gene: 118480196

Following gene: 118480194

Centisome position: 93.08

GC content: 36.17

Gene sequence:

>1587_bases
TTGTTTTTTACGGAATCGTTTATACTTATAGATAGAAGAATGTGTGAACGAAGAAAACAAAAAACTGGAGGATATATGGG
GAAAAATCAAAGAATATATAAGGAGAACGGACAAGTTATCTCTTTTAATCAATTAGCGGACTTCTTTTATAAAAAAGGGA
TGAGGGCTTACAAAGGGCAAAAATTGCAAGATGCAATTAAATATTTTCGAAGAGCGGCACAAAGTGAGAAGGAGCCGTTT
ATTTTATGTCAATTAGCAACAGTATTATCTGAGGCTGGTGAATACCAAGAGTCGAATCAAACCTTCTTTAAGCTTGTTAG
ATCTAATCCAGAACTTGAACAGTGTTATTATTTTATTGCAAATAATTATGCATATATGGGACTATTCCAGCAGGCGAAGA
AATATGCGGATCGCTATTTAGAAGTTGCAGAAGAGAAGGAATTTGTTGAAGATACATTAGAATTACTTGAAATTATGGAA
GAAGAAGCGATGGGTGCAGAAGAGATTGAGGATGAAGATGATTTAATTGTTATGCAGGAAGAAGCGAATCGTTATATTCG
TAACGGACAATTGGAAGAAGCAATTGCTACATTAGAAATTGTTACGAAAGATTATCCGGAATTTTGGTCGGGGCATAATA
ATTTAGCCATTGCGCATTTTCAATCTGGCAATGTAGATAAGGCACTGAAATTAACGGAAATGATTTTAGATAAAAATCCA
GGGAATATACATGCGCTTTGTAATACGCTTATTTTTCTATATTCAATTGGAGAGCATAAACAAGTAGAAGCATTAGCTAC
TCAGTTAGTTGCAGTATATCCAATTTCATTTGAACATCGTTTGAAACTTGGAACGACACTTGCAACAATTGGTCATTTTG
AGCATGCGTATAAATGGTTTAAAGTATTAAAACGTCAAGGATACGAAGGAGACGTTAGTTTTTATTATTGGTTTGCCTAT
TCTGCTTATATGGTGAAAGATCAGCAAGTAGCTGAAAAAATGTGGCAACATGTTGTAGAATTGCACCCTGATAAAAAGGG
AAAAGAACCGTGGAATGCACTGAATTTAGCCGATGAAGGACAAAACGTGTTATTTGAAGAATTACGAAAATCATTTCAGC
AAAGTGCAACGCTAGAGGAACAAATGCTAGCTTTATATTTAATGAATGAATTATCAACGCCGGAGAAGGTGGGGTTCTTC
TTTGATGTAACGCAGGCAAAGAATGGTGTTCCAATCGTATCGCAACTTGCAAAGTATTTCTTTTTACTGAATAGCCATAA
GAGCATCCCAGCTGATTTACAGCAATTTGAACAGTGCGCACGGATCGCGGATGCTTTATACAATTATACGCAAAAAGATG
ATGAATTAATCGAAGAGTGTTTACAGTTTTGGTTTTGTACGTTTATACGTTTATATACATCTGGGGCAGTTTTTACAAAT
GTATACGGCTGGTCAGCTGCGGTGGAATATATCGTACGCAGCGAACAAGGAAATAAGATGACACAGTCAGAGCTCGGAGA
TGTATATAATGTATCTGTAGCGACTGTTCGAAAGTATGTGCAAGCTGTTAAGCGTACGCACACATAA

Upstream 100 bases:

>100_bases
AAAGAGCAAATGGAGGCTAGAGAAGGTTCATACTAGAAATGTAACATTTCTCTTCTTTTTTAATGAATAAAAAGGAAATA
ATTGAGTATAATATACTGTT

Downstream 100 bases:

>100_bases
GTAAGCAAATCATTGGGAAAAAAATGATGCGAACAGTATAATGAGGGTAACTTAATTGTGTAGGAATGAATAGGAGTGAA
TAGTGTGTCAGAAGAAAAAA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MFFTESFILIDRRMCERRKQKTGGYMGKNQRIYKENGQVISFNQLADFFYKKGMRAYKGQKLQDAIKYFRRAAQSEKEPF
ILCQLATVLSEAGEYQESNQTFFKLVRSNPELEQCYYFIANNYAYMGLFQQAKKYADRYLEVAEEKEFVEDTLELLEIME
EEAMGAEEIEDEDDLIVMQEEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHNNLAIAHFQSGNVDKALKLTEMILDKNP
GNIHALCNTLIFLYSIGEHKQVEALATQLVAVYPISFEHRLKLGTTLATIGHFEHAYKWFKVLKRQGYEGDVSFYYWFAY
SAYMVKDQQVAEKMWQHVVELHPDKKGKEPWNALNLADEGQNVLFEELRKSFQQSATLEEQMLALYLMNELSTPEKVGFF
FDVTQAKNGVPIVSQLAKYFFLLNSHKSIPADLQQFEQCARIADALYNYTQKDDELIEECLQFWFCTFIRLYTSGAVFTN
VYGWSAAVEYIVRSEQGNKMTQSELGDVYNVSVATVRKYVQAVKRTHT

Sequences:

>Translated_528_residues
MFFTESFILIDRRMCERRKQKTGGYMGKNQRIYKENGQVISFNQLADFFYKKGMRAYKGQKLQDAIKYFRRAAQSEKEPF
ILCQLATVLSEAGEYQESNQTFFKLVRSNPELEQCYYFIANNYAYMGLFQQAKKYADRYLEVAEEKEFVEDTLELLEIME
EEAMGAEEIEDEDDLIVMQEEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHNNLAIAHFQSGNVDKALKLTEMILDKNP
GNIHALCNTLIFLYSIGEHKQVEALATQLVAVYPISFEHRLKLGTTLATIGHFEHAYKWFKVLKRQGYEGDVSFYYWFAY
SAYMVKDQQVAEKMWQHVVELHPDKKGKEPWNALNLADEGQNVLFEELRKSFQQSATLEEQMLALYLMNELSTPEKVGFF
FDVTQAKNGVPIVSQLAKYFFLLNSHKSIPADLQQFEQCARIADALYNYTQKDDELIEECLQFWFCTFIRLYTSGAVFTN
VYGWSAAVEYIVRSEQGNKMTQSELGDVYNVSVATVRKYVQAVKRTHT
>Mature_528_residues
MFFTESFILIDRRMCERRKQKTGGYMGKNQRIYKENGQVISFNQLADFFYKKGMRAYKGQKLQDAIKYFRRAAQSEKEPF
ILCQLATVLSEAGEYQESNQTFFKLVRSNPELEQCYYFIANNYAYMGLFQQAKKYADRYLEVAEEKEFVEDTLELLEIME
EEAMGAEEIEDEDDLIVMQEEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHNNLAIAHFQSGNVDKALKLTEMILDKNP
GNIHALCNTLIFLYSIGEHKQVEALATQLVAVYPISFEHRLKLGTTLATIGHFEHAYKWFKVLKRQGYEGDVSFYYWFAY
SAYMVKDQQVAEKMWQHVVELHPDKKGKEPWNALNLADEGQNVLFEELRKSFQQSATLEEQMLALYLMNELSTPEKVGFF
FDVTQAKNGVPIVSQLAKYFFLLNSHKSIPADLQQFEQCARIADALYNYTQKDDELIEECLQFWFCTFIRLYTSGAVFTN
VYGWSAAVEYIVRSEQGNKMTQSELGDVYNVSVATVRKYVQAVKRTHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61453; Mature: 61453

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFTESFILIDRRMCERRKQKTGGYMGKNQRIYKENGQVISFNQLADFFYKKGMRAYKGQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEHHHHHHHHHHCCHHHHCCC
KLQDAIKYFRRAAQSEKEPFILCQLATVLSEAGEYQESNQTFFKLVRSNPELEQCYYFIA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
NNYAYMGLFQQAKKYADRYLEVAEEKEFVEDTLELLEIMEEEAMGAEEIEDEDDLIVMQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEHH
EANRYIRNGQLEEAIATLEIVTKDYPEFWSGHNNLAIAHFQSGNVDKALKLTEMILDKNP
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
GNIHALCNTLIFLYSIGEHKQVEALATQLVAVYPISFEHRLKLGTTLATIGHFEHAYKWF
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVLKRQGYEGDVSFYYWFAYSAYMVKDQQVAEKMWQHVVELHPDKKGKEPWNALNLADEG
HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QNVLFEELRKSFQQSATLEEQMLALYLMNELSTPEKVGFFFDVTQAKNGVPIVSQLAKYF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCCHHHHHHHHH
FLLNSHKSIPADLQQFEQCARIADALYNYTQKDDELIEECLQFWFCTFIRLYTSGAVFTN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
VYGWSAAVEYIVRSEQGNKMTQSELGDVYNVSVATVRKYVQAVKRTHT
HHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFFTESFILIDRRMCERRKQKTGGYMGKNQRIYKENGQVISFNQLADFFYKKGMRAYKGQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEHHHHHHHHHHCCHHHHCCC
KLQDAIKYFRRAAQSEKEPFILCQLATVLSEAGEYQESNQTFFKLVRSNPELEQCYYFIA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
NNYAYMGLFQQAKKYADRYLEVAEEKEFVEDTLELLEIMEEEAMGAEEIEDEDDLIVMQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEHH
EANRYIRNGQLEEAIATLEIVTKDYPEFWSGHNNLAIAHFQSGNVDKALKLTEMILDKNP
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
GNIHALCNTLIFLYSIGEHKQVEALATQLVAVYPISFEHRLKLGTTLATIGHFEHAYKWF
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVLKRQGYEGDVSFYYWFAYSAYMVKDQQVAEKMWQHVVELHPDKKGKEPWNALNLADEG
HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QNVLFEELRKSFQQSATLEEQMLALYLMNELSTPEKVGFFFDVTQAKNGVPIVSQLAKYF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCCHHHHHHHHH
FLLNSHKSIPADLQQFEQCARIADALYNYTQKDDELIEECLQFWFCTFIRLYTSGAVFTN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
VYGWSAAVEYIVRSEQGNKMTQSELGDVYNVSVATVRKYVQAVKRTHT
HHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]