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The map label for this gene is whiA [H]

Identifier: 118480189

GI number: 118480189

Start: 4886024

End: 4886983

Strand: Reverse

Name: whiA [H]

Synonym: BALH_4644

Alternate gene names: 118480189

Gene position: 4886983-4886024 (Counterclockwise)

Preceding gene: 118480190

Following gene: 118480188

Centisome position: 92.96

GC content: 35.73

Gene sequence:

>960_bases
GTGTTGGCTGTGTCATTTGCATCAGAAACAAAGAAAGAGTTGACGAATCTAGAGATGAAGGAATGCTGTGAGAAAGCAGA
ATTATCAGCGCTGCTTCGCATGAACGGATCGCTTTCTTTTTCAAACCGTCGTCTATCAATCGATATTCAAACGGAAAATG
CGGCAATCGCAAGAAGGATTTATACGCTTTTGAAAAAAGGATATGACGTGACGGTAGAATTACTTGTTCGTAAAAAAATG
CGATTGAAGAAAAATAATGTATATATCGTAAGGCTTGTTGAGAAGTCTCGCGAAATATTAGCTGATCTTCATATCGTACG
AGATGACTTTTCATTTATTCGAAATATATCACAAGAATTAATTGAGAAGAAATGTTGTAAACGATCGTATTTACGCGGTG
CATTTTTAGCAGGTGGTTCAGTAAATAACCCAGAAACATCATCTTATCATTTAGAGATCTTTTCGTTATATAAGGAACAT
AATGATGCTATATGTGAACTGATGAACGGATTTGATTTAAATAGTAAGACGTTGGAAAGAAGAAAAGGGTACATTACGTA
TTTGAAAGAAGCAGAAAAGATTACAGAGTTTTTAAATATTATAGGTGCACATAATGCACTTTTGAGATTTGAAGACATTC
GAATCGTACGTGATATGCGTAATTCTGTAAATCGTTTAGTGAACTGCGAAACAGCTAATTTAAATAAAACAATTGGTGCA
GCGCTAAGGCAGATTGAAAATATCCGCTATATTGATGAGACGGTTGGTCTTGATATATTGCCGGATAAACTAAGAGAAAT
TGCGCAACTACGAAGAGATTATCAAGATGTAACATTGAAAGAGTTAGGCGAGATGGTATCCGGGGGGAAAATTAGTAAAT
CGGGTATTAATCATCGTTTGCGTAAAATCGATGATATTGCAGAGAAATTACGCGCGGGGGAAACGGTAGCAAAAAAATAA

Upstream 100 bases:

>100_bases
TTTTATATTCACTGTTGTAGATGTGCGTTATCTCGTTTGAGGTAACGCTCCTCATTTCATATAGGACAAGATTTTTGTTC
CACAATAATCGTATAAGGAG

Downstream 100 bases:

>100_bases
GAGGTTAAAGGGGAAATGGAGCTGTGGTTCAAAAAAGAGTTCAGGTTTCATTAAAAAACGGTTTACAAGCACGTCCGGCT
GCGTTGTTTGTACAAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLAVSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKM
RLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEH
NDAICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGA
ALRQIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK

Sequences:

>Translated_319_residues
MLAVSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKM
RLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEH
NDAICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGA
ALRQIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK
>Mature_319_residues
MLAVSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKM
RLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEH
NDAICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGA
ALRQIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 36650; Mature: 36650

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRI
CEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHH
YTLLKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQEL
HHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTLER
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ALRQIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHH
RKIDDIAEKLRAGETVAKK
HHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MLAVSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRI
CEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHH
YTLLKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQEL
HHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTLER
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ALRQIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHH
RKIDDIAEKLRAGETVAKK
HHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA