BacMap

Definition	Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession	NC_008600
Length	5,257,091

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The map label for this gene is ytbE [H]

Identifier: 118480145

GI number: 118480145

Start: 4838768

End: 4839607

Strand: Reverse

Name: ytbE [H]

Synonym: BALH_4597

Alternate gene names: 118480145

Gene position: 4839607-4838768 (Counterclockwise)

Preceding gene: 118480146

Following gene: 118480144

Centisome position: 92.06

GC content: 35.83

Gene sequence:

>840_bases
ATGAAAAACTTACAAAGTAAAGCAGTATTAAATAATGGTGTGGAAATGCCTTGGTTCGGTTTAGGTGTATTTAAAGTAGA
AGAAGGACCAGAACTTGTAGAAGCGATTAAATCAGCAATTAAAGCAGGATACCGCAGCATCGATACAGCTGCAATTTACG
GAAATGAAAAAGCTGTAGGTGAAGGAATCCGTGCAGGTATCGAAGCAACTGGTATTTCAAGAGAAGATTTATTCATCACT
TCAAAAGTATGGAACGCAGATCAAGGATATGAAACAACAATCGCTGCATACGAAGAGAGTCTAAAAAAATTAGGACTAGA
TTATTTAGATCTATATCTTGTTCACTGGCCTTCAGAAGGAAAATATAAAGATACGTGGAGAGCGTTAGAAACACTTTATA
AAGAAAAGCGCGTACGTGCAATTGGTGTAAGTAACTTCCAAATCCATCACTTACAAGATGTAATGAAAGATGCAGAAATT
AAACCAATGATTAACCAAGTAGAATACCACCCTCGTTTGACACAAAAAGAATTACAAGCTTTCTGTAAAGAACAAGGTAT
TCAAATGGAAGCATGGTCACCACTAATGCAAGGTCAATTATTAGATAACGAAACATTACAAGAGATTGCTGAGAAACACG
GTAAAACGACAGCGCAAGTTATTTTACGTTGGGATCTTCAAAATGGAGTAATTACAATTCCAAAATCAACGAAAGAACAC
CGCATCATTGCAAATGCTGATGTATTTAACTTTGAATTAACGAAAGAAGATATGGAAAAAATCGATGCGTTAAACGAAAA
TCACCGCGTTGGTCCAGATCCTGATAACTTTGATTTCTAA

Upstream 100 bases:

>100_bases
TGGGTAGGCGGCCTTATGGTAGTAGCCGCTGTTATTTTAACAGCGTGGAGCATGACATTAGAAAAAAGAGATCAAGTAAA
ATAAAAGGAGAGAAAATAAA

Downstream 100 bases:

>100_bases
AATTAAAGTAAGAAAGAAGAGTGCGTAAAAGCACTCTTTTTTGTGCATAAAAATAGTTTCTAATTAAATACTACTTAGTA
TTAAGTTTGTTATAAGGGGC

Product: aldo/keto reductase family oxidoreductase

Products: 2-keto-L-gulonate; NADP [C]

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKNLQSKAVLNNGVEMPWFGLGVFKVEEGPELVEAIKSAIKAGYRSIDTAAIYGNEKAVGEGIRAGIEATGISREDLFIT
SKVWNADQGYETTIAAYEESLKKLGLDYLDLYLVHWPSEGKYKDTWRALETLYKEKRVRAIGVSNFQIHHLQDVMKDAEI
KPMINQVEYHPRLTQKELQAFCKEQGIQMEAWSPLMQGQLLDNETLQEIAEKHGKTTAQVILRWDLQNGVITIPKSTKEH
RIIANADVFNFELTKEDMEKIDALNENHRVGPDPDNFDF

Sequences:

>Translated_279_residues
MKNLQSKAVLNNGVEMPWFGLGVFKVEEGPELVEAIKSAIKAGYRSIDTAAIYGNEKAVGEGIRAGIEATGISREDLFIT
SKVWNADQGYETTIAAYEESLKKLGLDYLDLYLVHWPSEGKYKDTWRALETLYKEKRVRAIGVSNFQIHHLQDVMKDAEI
KPMINQVEYHPRLTQKELQAFCKEQGIQMEAWSPLMQGQLLDNETLQEIAEKHGKTTAQVILRWDLQNGVITIPKSTKEH
RIIANADVFNFELTKEDMEKIDALNENHRVGPDPDNFDF
>Mature_279_residues
MKNLQSKAVLNNGVEMPWFGLGVFKVEEGPELVEAIKSAIKAGYRSIDTAAIYGNEKAVGEGIRAGIEATGISREDLFIT
SKVWNADQGYETTIAAYEESLKKLGLDYLDLYLVHWPSEGKYKDTWRALETLYKEKRVRAIGVSNFQIHHLQDVMKDAEI
KPMINQVEYHPRLTQKELQAFCKEQGIQMEAWSPLMQGQLLDNETLQEIAEKHGKTTAQVILRWDLQNGVITIPKSTKEH
RIIANADVFNFELTKEDMEKIDALNENHRVGPDPDNFDF

Specific function: Reduction [C]

COG id: COG0656

COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase family [H]

Homologues:

Organism=Homo sapiens, GI24497577, Length=295, Percent_Identity=38.9830508474576, Blast_Score=220, Evalue=1e-57,
Organism=Homo sapiens, GI5174391, Length=295, Percent_Identity=38.9830508474576, Blast_Score=220, Evalue=1e-57,
Organism=Homo sapiens, GI223468663, Length=292, Percent_Identity=39.7260273972603, Blast_Score=204, Evalue=6e-53,
Organism=Homo sapiens, GI93277124, Length=305, Percent_Identity=37.3770491803279, Blast_Score=200, Evalue=1e-51,
Organism=Homo sapiens, GI310109922, Length=290, Percent_Identity=39.3103448275862, Blast_Score=196, Evalue=2e-50,
Organism=Homo sapiens, GI310109920, Length=310, Percent_Identity=38.3870967741935, Blast_Score=194, Evalue=5e-50,
Organism=Homo sapiens, GI5453543, Length=310, Percent_Identity=38.3870967741935, Blast_Score=194, Evalue=6e-50,
Organism=Homo sapiens, GI45446745, Length=310, Percent_Identity=38.0645161290323, Blast_Score=194, Evalue=7e-50,
Organism=Homo sapiens, GI4503285, Length=310, Percent_Identity=38.0645161290323, Blast_Score=194, Evalue=7e-50,
Organism=Homo sapiens, GI291291012, Length=278, Percent_Identity=39.568345323741, Blast_Score=191, Evalue=6e-49,
Organism=Homo sapiens, GI24497585, Length=295, Percent_Identity=38.6440677966102, Blast_Score=191, Evalue=7e-49,
Organism=Homo sapiens, GI24497583, Length=293, Percent_Identity=37.8839590443686, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI4502049, Length=301, Percent_Identity=39.8671096345515, Blast_Score=185, Evalue=3e-47,
Organism=Homo sapiens, GI5174695, Length=296, Percent_Identity=35.472972972973, Blast_Score=177, Evalue=8e-45,
Organism=Homo sapiens, GI300116273, Length=275, Percent_Identity=34.1818181818182, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI300116271, Length=274, Percent_Identity=33.9416058394161, Blast_Score=148, Evalue=6e-36,
Organism=Homo sapiens, GI310109924, Length=159, Percent_Identity=37.7358490566038, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI310109926, Length=110, Percent_Identity=47.2727272727273, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI207028673, Length=110, Percent_Identity=46.3636363636364, Blast_Score=100, Evalue=1e-21,
Organism=Escherichia coli, GI87082198, Length=272, Percent_Identity=44.1176470588235, Blast_Score=242, Evalue=2e-65,
Organism=Escherichia coli, GI1786400, Length=263, Percent_Identity=36.8821292775665, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1788081, Length=276, Percent_Identity=34.0579710144928, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1788070, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI87081735, Length=282, Percent_Identity=24.113475177305, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787674, Length=275, Percent_Identity=25.8181818181818, Blast_Score=68, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71998625, Length=272, Percent_Identity=41.1764705882353, Blast_Score=207, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17564128, Length=296, Percent_Identity=37.1621621621622, Blast_Score=204, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17537077, Length=295, Percent_Identity=40.6779661016949, Blast_Score=199, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI17537075, Length=304, Percent_Identity=39.8026315789474, Blast_Score=197, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17561298, Length=270, Percent_Identity=37.037037037037, Blast_Score=185, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17538386, Length=271, Percent_Identity=37.6383763837638, Blast_Score=183, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17552492, Length=273, Percent_Identity=33.6996336996337, Blast_Score=179, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17537079, Length=308, Percent_Identity=33.1168831168831, Blast_Score=177, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17550248, Length=300, Percent_Identity=36.3333333333333, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17561300, Length=271, Percent_Identity=35.4243542435424, Blast_Score=163, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI17562292, Length=274, Percent_Identity=32.1167883211679, Blast_Score=161, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17566692, Length=286, Percent_Identity=33.5664335664336, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17550246, Length=87, Percent_Identity=41.3793103448276, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6321896, Length=317, Percent_Identity=37.5394321766561, Blast_Score=206, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6320576, Length=300, Percent_Identity=35.6666666666667, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6324694, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6322556, Length=260, Percent_Identity=36.1538461538462, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6319625, Length=296, Percent_Identity=37.5, Blast_Score=182, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6320079, Length=287, Percent_Identity=35.191637630662, Blast_Score=148, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24663317, Length=292, Percent_Identity=40.4109589041096, Blast_Score=211, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24662789, Length=295, Percent_Identity=38.3050847457627, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24644950, Length=299, Percent_Identity=37.7926421404682, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24657054, Length=290, Percent_Identity=38.6206896551724, Blast_Score=198, Evalue=4e-51,
Organism=Drosophila melanogaster, GI221378297, Length=319, Percent_Identity=35.423197492163, Blast_Score=191, Evalue=5e-49,
Organism=Drosophila melanogaster, GI20129731, Length=296, Percent_Identity=35.8108108108108, Blast_Score=190, Evalue=9e-49,
Organism=Drosophila melanogaster, GI24662785, Length=296, Percent_Identity=41.8918918918919, Blast_Score=181, Evalue=4e-46,
Organism=Drosophila melanogaster, GI24662781, Length=293, Percent_Identity=41.9795221843003, Blast_Score=180, Evalue=1e-45,
Organism=Drosophila melanogaster, GI21356425, Length=291, Percent_Identity=35.3951890034364, Blast_Score=178, Evalue=3e-45,
Organism=Drosophila melanogaster, GI45553081, Length=289, Percent_Identity=33.2179930795848, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI281366140, Length=256, Percent_Identity=32.8125, Blast_Score=154, Evalue=8e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR018170
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 31754; Mature: 31754

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00798 ALDOKETO_REDUCTASE_1 ; PS00062 ALDOKETO_REDUCTASE_2 ; PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLQSKAVLNNGVEMPWFGLGVFKVEEGPELVEAIKSAIKAGYRSIDTAAIYGNEKAVG
CCCCHHHHHHHCCCCCCEECCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
EGIRAGIEATGISREDLFITSKVWNADQGYETTIAAYEESLKKLGLDYLDLYLVHWPSEG
HHHHCCCHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEEECCCCC
KYKDTWRALETLYKEKRVRAIGVSNFQIHHLQDVMKDAEIKPMINQVEYHPRLTQKELQA
CHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHH
FCKEQGIQMEAWSPLMQGQLLDNETLQEIAEKHGKTTAQVILRWDLQNGVITIPKSTKEH
HHHHCCCCCHHCCHHHCCCCCCHHHHHHHHHHHCCCEEHEEEEEECCCCEEECCCCCCCC
RIIANADVFNFELTKEDMEKIDALNENHRVGPDPDNFDF
EEEECCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNLQSKAVLNNGVEMPWFGLGVFKVEEGPELVEAIKSAIKAGYRSIDTAAIYGNEKAVG
CCCCHHHHHHHCCCCCCEECCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
EGIRAGIEATGISREDLFITSKVWNADQGYETTIAAYEESLKKLGLDYLDLYLVHWPSEG
HHHHCCCHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEEECCCCC
KYKDTWRALETLYKEKRVRAIGVSNFQIHHLQDVMKDAEIKPMINQVEYHPRLTQKELQA
CHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHH
FCKEQGIQMEAWSPLMQGQLLDNETLQEIAEKHGKTTAQVILRWDLQNGVITIPKSTKEH
HHHHCCCCCHHCCHHHCCCCCCHHHHHHHHHHHCCCEEHEEEEEECCCCEEECCCCCCCC
RIIANADVFNFELTKEDMEKIDALNENHRVGPDPDNFDF
EEEECCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2,5-diketo-D-gluconate; NADPH [C]

Specific reaction: 2,5-diketo-D-gluconate + NADPH = 2-keto-L-gulonate + NADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]