Click here to switch to the map view.

The map label for this gene is sufC [H]

Identifier: 118480067

GI number: 118480067

Start: 4754040

End: 4754825

Strand: Reverse

Name: sufC [H]

Synonym: BALH_4515

Alternate gene names: 118480067

Gene position: 4754825-4754040 (Counterclockwise)

Preceding gene: 118480068

Following gene: 118480066

Centisome position: 90.45

GC content: 39.19

Gene sequence:

>786_bases
ATGGCTGGTTCTACATTAACGGTTAAAGACTTACACGTATCAATTGATGGCAAAGAAATTTTAAAAGGTGTAAACCTTGA
AGTAAAAGGTGGAGAAATCCACGCAATTATGGGACCTAACGGAACAGGTAAATCAACTTTATCTTCTGCAATTATGGGTC
ACCCAAAGTATGAAGTAACAGAAGGTAGCATCATCATCGACGGTGAAGATGTATTAGAGATGGAAGTAGACGAGCGCGCA
CAAGCAGGTCTATTCTTAGCAATGCAATATCCAAGTGAAATTAGCGGAGTAACAAACGCTGACTTCTTACGTTCTGCAAT
TAACGCACGTCGTGAAGAAGGCGATGAAATTTCTCTTATGAAATTTATCCGTACATTAGATAAAAACATGGAATTCCTAG
AAATGGATCCAGAAATGGCACAACGTTACTTAAACGAAGGTTTCTCTGGTGGAGAGAAAAAACGTAACGAAATCCTTCAA
TTAATGATGATTGAGCCAAAAATCGCAATCTTAGACGAAATCGACTCAGGTCTTGATATTGATGCGTTAAAAGTTGTATC
TAAAGGTATTAACGAAATGCGCGGCGAAGAGTTCGGTTGCCTAATGATTACGCATTACCAACGTTTATTAAACTACATCA
CTCCAGACTTCGTTCACGTTATGATGAACGGTCGTATCGTTAAATCTGGTGGCCCTGAGCTTGCACAACGTCTAGAAGCT
GAAGGTTACGACTGGATTAAAAAAGAATTAGGTATTGAAGACGAAACAACAGAGCAAGAAGCGTAA

Upstream 100 bases:

>100_bases
ATCATTTTATTTGATATAAAATTAGAATGAGAATAAAATGAGAATATGAACGTTTTAGGAATTTTTAAAATGTATATATA
GGATTAATGGAGGTATTGAG

Downstream 100 bases:

>100_bases
GAGAGGAGCATAAACATGACAATCGGTACATTACCTTTCGATCAAGAAACAATCCGTCAACGCGCAAGCGAAGTAAACGA
AGCAGCTTGGTTGACTGAGT

Product: iron regulated ABC transporter ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAGSTLTVKDLHVSIDGKEILKGVNLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTEGSIIIDGEDVLEMEVDERA
QAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRTLDKNMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQ
LMMIEPKIAILDEIDSGLDIDALKVVSKGINEMRGEEFGCLMITHYQRLLNYITPDFVHVMMNGRIVKSGGPELAQRLEA
EGYDWIKKELGIEDETTEQEA

Sequences:

>Translated_261_residues
MAGSTLTVKDLHVSIDGKEILKGVNLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTEGSIIIDGEDVLEMEVDERA
QAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRTLDKNMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQ
LMMIEPKIAILDEIDSGLDIDALKVVSKGINEMRGEEFGCLMITHYQRLLNYITPDFVHVMMNGRIVKSGGPELAQRLEA
EGYDWIKKELGIEDETTEQEA
>Mature_260_residues
AGSTLTVKDLHVSIDGKEILKGVNLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTEGSIIIDGEDVLEMEVDERAQ
AGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRTLDKNMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQL
MMIEPKIAILDEIDSGLDIDALKVVSKGINEMRGEEFGCLMITHYQRLLNYITPDFVHVMMNGRIVKSGGPELAQRLEAE
GYDWIKKELGIEDETTEQEA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9961252, Length=230, Percent_Identity=30.8695652173913, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI4505771, Length=230, Percent_Identity=30.8695652173913, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI255708477, Length=217, Percent_Identity=30.8755760368664, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI148612844, Length=217, Percent_Identity=30.8755760368664, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI42741659, Length=225, Percent_Identity=29.7777777777778, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI9961250, Length=237, Percent_Identity=29.957805907173, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI9955963, Length=229, Percent_Identity=27.9475982532751, Blast_Score=68, Evalue=9e-12,
Organism=Escherichia coli, GI1787972, Length=246, Percent_Identity=50.4065040650407, Blast_Score=258, Evalue=3e-70,
Organism=Escherichia coli, GI1788761, Length=240, Percent_Identity=25, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=28.755364806867, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789593, Length=229, Percent_Identity=26.2008733624454, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=29.2576419213974, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=25, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787759, Length=249, Percent_Identity=28.5140562248996, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789864, Length=243, Percent_Identity=27.9835390946502, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786698, Length=195, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787370, Length=224, Percent_Identity=27.2321428571429, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786654, Length=248, Percent_Identity=26.2096774193548, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787143, Length=228, Percent_Identity=26.7543859649123, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786319, Length=190, Percent_Identity=28.4210526315789, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788210, Length=224, Percent_Identity=25, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787500, Length=222, Percent_Identity=27.9279279279279, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=242, Percent_Identity=28.5123966942149, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193209708, Length=241, Percent_Identity=29.045643153527, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI193211017, Length=242, Percent_Identity=28.099173553719, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193211015, Length=242, Percent_Identity=28.099173553719, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI212646699, Length=241, Percent_Identity=28.6307053941909, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=220, Percent_Identity=29.5454545454545, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17567265, Length=255, Percent_Identity=30.9803921568627, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25146777, Length=231, Percent_Identity=29.004329004329, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=235, Percent_Identity=28.5106382978723, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=232, Percent_Identity=28.0172413793103, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567269, Length=235, Percent_Identity=28.936170212766, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=222, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=235, Percent_Identity=27.6595744680851, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=224, Percent_Identity=28.125, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=257, Percent_Identity=26.8482490272374, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17551702, Length=244, Percent_Identity=27.0491803278689, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=224, Percent_Identity=26.7857142857143, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17551700, Length=216, Percent_Identity=27.3148148148148, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=236, Percent_Identity=27.5423728813559, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=217, Percent_Identity=26.2672811059908, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281363262, Length=219, Percent_Identity=31.5068493150685, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24653245, Length=219, Percent_Identity=31.5068493150685, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI85726357, Length=220, Percent_Identity=30.4545454545455, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24659289, Length=220, Percent_Identity=27.7272727272727, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29032; Mature: 28900

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSTLTVKDLHVSIDGKEILKGVNLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVT
CCCCEEEEEEEEEEECHHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEE
EGSIIIDGEDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLM
CCCEEECCCHHEEECHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
KFIRTLDKNMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDI
HHHHHHHCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCH
DALKVVSKGINEMRGEEFGCLMITHYQRLLNYITPDFVHVMMNGRIVKSGGPELAQRLEA
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCHHHHHHHHCCEEEECCCHHHHHHHHC
EGYDWIKKELGIEDETTEQEA
CCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AGSTLTVKDLHVSIDGKEILKGVNLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVT
CCCEEEEEEEEEEECHHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEE
EGSIIIDGEDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLM
CCCEEECCCHHEEECHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
KFIRTLDKNMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDI
HHHHHHHCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCH
DALKVVSKGINEMRGEEFGCLMITHYQRLLNYITPDFVHVMMNGRIVKSGGPELAQRLEA
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCHHHHHHHHCCEEEECCCHHHHHHHHC
EGYDWIKKELGIEDETTEQEA
CCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]