| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yunB [H]
Identifier: 118480058
GI number: 118480058
Start: 4744963
End: 4745694
Strand: Reverse
Name: yunB [H]
Synonym: BALH_4506
Alternate gene names: 118480058
Gene position: 4745694-4744963 (Counterclockwise)
Preceding gene: 118480059
Following gene: 118480056
Centisome position: 90.27
GC content: 37.02
Gene sequence:
>732_bases ATGAGTATATTTCGTTCGAAAAATTCGCGGTTTCGAAAGGGGCCTATTTCCTTTCGGCACATACTGCTTATGTCGTTTAT TCTTTTTGTCATATTACTCGTGCAAGGATTATGGATTGTGAACAGCAGCATTCAGCCGACATTAATGAAATATGGAGAAG TAGAGACACATAAAATGGCGACAGCGGTTATGACGAAGGCGGTAAAAGATAGAATTGATGAAGGGTTCGATGTCGATTCA TTAATGAAAGTACAAAATGATAAAAACGGAAAAGTATCCACAATTAACTTAAATACGAAGCAAGTAAATGAAATCGTAAC GTCAACGACCACATACATAGAAAAATATTTACAGCAAGTAGAACAAGGGAATTTAAATGGGCTAGGTATTTCTGAAAAAA ACGGGGCAACGATGGCAGTTCCTTTTGGCCGTGTAACAAATAATGCGCTTCTTGGAAATATAGGACCCGATATTCCAATT GATTTCACGACGATTGGTCATGTAAATACGGATATTAAACAAAAAATTGAACCACACGGGATCAATACGACAGCGATTCA AATTATTATGGAGATGGAAGTCACGTTGCAAGTGGTTATTCCATTTCATACGAAAGAAATAAAAGTGAAACAAAATGTTC CAATTGCGACGCGCATTGTTCAAGGAGAAGTGCCTACTTATTATGGAAGCGGAAGTGTTGTTGTACCTAATAAAAAGAAA ACGGATAGTTAG
Upstream 100 bases:
>100_bases TACGGCTGGCACAATCGGAAAAGAAGCATTATTAAAAATGAGATAAGCATATATCGTCCCTCCTTCTTGCATAGAAATGA TATAAGAAGGAGGGTTTTTT
Downstream 100 bases:
>100_bases TTGAAAAATAACCGTAGCAATGTGCTACGGTTATCGTTTTGTATTTGCGCGTTCTTTTCGCTCCCAAAGACTTAAATGCA TGTATGGATCGAAAGCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSIFRSKNSRFRKGPISFRHILLMSFILFVILLVQGLWIVNSSIQPTLMKYGEVETHKMATAVMTKAVKDRIDEGFDVDS LMKVQNDKNGKVSTINLNTKQVNEIVTSTTTYIEKYLQQVEQGNLNGLGISEKNGATMAVPFGRVTNNALLGNIGPDIPI DFTTIGHVNTDIKQKIEPHGINTTAIQIIMEMEVTLQVVIPFHTKEIKVKQNVPIATRIVQGEVPTYYGSGSVVVPNKKK TDS
Sequences:
>Translated_243_residues MSIFRSKNSRFRKGPISFRHILLMSFILFVILLVQGLWIVNSSIQPTLMKYGEVETHKMATAVMTKAVKDRIDEGFDVDS LMKVQNDKNGKVSTINLNTKQVNEIVTSTTTYIEKYLQQVEQGNLNGLGISEKNGATMAVPFGRVTNNALLGNIGPDIPI DFTTIGHVNTDIKQKIEPHGINTTAIQIIMEMEVTLQVVIPFHTKEIKVKQNVPIATRIVQGEVPTYYGSGSVVVPNKKK TDS >Mature_242_residues SIFRSKNSRFRKGPISFRHILLMSFILFVILLVQGLWIVNSSIQPTLMKYGEVETHKMATAVMTKAVKDRIDEGFDVDSL MKVQNDKNGKVSTINLNTKQVNEIVTSTTTYIEKYLQQVEQGNLNGLGISEKNGATMAVPFGRVTNNALLGNIGPDIPID FTTIGHVNTDIKQKIEPHGINTTAIQIIMEMEVTLQVVIPFHTKEIKVKQNVPIATRIVQGEVPTYYGSGSVVVPNKKKT DS
Specific function: Required for sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014197 [H]
Pfam domain/function: PF09560 Spore_YunB [H]
EC number: NA
Molecular weight: Translated: 27002; Mature: 26871
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFRSKNSRFRKGPISFRHILLMSFILFVILLVQGLWIVNSSIQPTLMKYGEVETHKMA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCHHHHHH TAVMTKAVKDRIDEGFDVDSLMKVQNDKNGKVSTINLNTKQVNEIVTSTTTYIEKYLQQV HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH EQGNLNGLGISEKNGATMAVPFGRVTNNALLGNIGPDIPIDFTTIGHVNTDIKQKIEPHG HCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHCCCCCC INTTAIQIIMEMEVTLQVVIPFHTKEIKVKQNVPIATRIVQGEVPTYYGSGSVVVPNKKK CCHHHHEEEEEEEEEEEEEEEECCCEEEEECCCCEEEEEEECCCCEEECCCCEEECCCCC TDS CCC >Mature Secondary Structure SIFRSKNSRFRKGPISFRHILLMSFILFVILLVQGLWIVNSSIQPTLMKYGEVETHKMA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCHHHHHH TAVMTKAVKDRIDEGFDVDSLMKVQNDKNGKVSTINLNTKQVNEIVTSTTTYIEKYLQQV HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH EQGNLNGLGISEKNGATMAVPFGRVTNNALLGNIGPDIPIDFTTIGHVNTDIKQKIEPHG HCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHCCCCCC INTTAIQIIMEMEVTLQVVIPFHTKEIKVKQNVPIATRIVQGEVPTYYGSGSVVVPNKKK CCHHHHEEEEEEEEEEEEEEEECCCEEEEECCCCEEEEEEECCCCEEECCCCEEECCCCC TDS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 12662922 [H]