| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118480045
Identifier: 118480045
GI number: 118480045
Start: 4734984
End: 4735616
Strand: Reverse
Name: 118480045
Synonym: BALH_4493
Alternate gene names: NA
Gene position: 4735616-4734984 (Counterclockwise)
Preceding gene: 118480046
Following gene: 118480044
Centisome position: 90.08
GC content: 37.28
Gene sequence:
>633_bases ATGGGGGAAGCACGTACGACGAAAGATGAAATTATCCAATTGTTGAAAGTAAAGGGAGAGCACACGGTAGCGGAACTAGC TGAAGTTTTAGAGATTACAGAAATGGCGATTCGAAGACATTTAAGTAATCTTGAGAAAGATGGTTTCATCTATTCTAAGA TGGTAAGACAACATGTCGGAAGACCAACTTATTTGTATGGATTAAGCGAAAAGGGAGAAGATACATTCCCGAAAGAGTAT AAGCAATTTGCGATTGATATGCTAGAAGATTTAGCTCGAATGGGCGATGAAAAAATACTTCGTTACGTTTTAAAAGAGAG AACGAAGCGAATGGAAGAACAGTTGCAAAAGCGAGTGAGTAATCAAAAGAATTTAGCATATAAAGTGCAAGAGATAGCGG CGATGCAAGAGAAAAATGGTTATATGGTTCAAATTAAGAGAGACGGAGAGAACTCTTTCGTAATTGAAAAACAAAACTGT CCGTTAAAGGAAATTGCAGAGAGATTCCCGCAAGTATGTGAAGATGAAAAAGAGATGTATAATCGTTTATTTGCAGGAGC AGATGTAAAGACGCTAGCAAATATGTGCGAGGGCGATTGTAGTTGTTCTTATCAAGTAAAAGAGAAAAAATGA
Upstream 100 bases:
>100_bases GACCTGTATCTGCATTTGTACCAGAATAATTATGCTTATAAGATCCCCAGAGAAAGCCTTTTGGGGGTCTTATATTGTAT GTGAGGGAGAAGGGTGAAGC
Downstream 100 bases:
>100_bases ACGTTATGGGGCGCTTTAAGGTAAAGCGTTTTTTTCTTTGTAAAAAGCGGGTAATATAAGAGTGGTATGATAAGGTGAGA ACGTTAGCATAGAAGGAGAG
Product: transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Regulatory Protein ArsR; DeoR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator ArsR Family; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcription Regulator Protein; ArsR Transcriptional Regulator; MarR Family Transcriptional Regulator; SufR Family Transcriptional Regulator; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator DeoR Family; Arsr Family Transcriptional Regulator; Transcription Regulator; ArsR Family Regulator; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; ParR Family Transcriptional Regulator; Transcriptional Regulator Protein-Like Protein
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGEARTTKDEIIQLLKVKGEHTVAELAEVLEITEMAIRRHLSNLEKDGFIYSKMVRQHVGRPTYLYGLSEKGEDTFPKEY KQFAIDMLEDLARMGDEKILRYVLKERTKRMEEQLQKRVSNQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNC PLKEIAERFPQVCEDEKEMYNRLFAGADVKTLANMCEGDCSCSYQVKEKK
Sequences:
>Translated_210_residues MGEARTTKDEIIQLLKVKGEHTVAELAEVLEITEMAIRRHLSNLEKDGFIYSKMVRQHVGRPTYLYGLSEKGEDTFPKEY KQFAIDMLEDLARMGDEKILRYVLKERTKRMEEQLQKRVSNQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNC PLKEIAERFPQVCEDEKEMYNRLFAGADVKTLANMCEGDCSCSYQVKEKK >Mature_209_residues GEARTTKDEIIQLLKVKGEHTVAELAEVLEITEMAIRRHLSNLEKDGFIYSKMVRQHVGRPTYLYGLSEKGEDTFPKEYK QFAIDMLEDLARMGDEKILRYVLKERTKRMEEQLQKRVSNQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNCP LKEIAERFPQVCEDEKEMYNRLFAGADVKTLANMCEGDCSCSYQVKEKK
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24491; Mature: 24359
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS51000 HTH_DEOR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEARTTKDEIIQLLKVKGEHTVAELAEVLEITEMAIRRHLSNLEKDGFIYSKMVRQHVG CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC RPTYLYGLSEKGEDTFPKEYKQFAIDMLEDLARMGDEKILRYVLKERTKRMEEQLQKRVS CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC NQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNCPLKEIAERFPQVCEDEKEMY CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHH NRLFAGADVKTLANMCEGDCSCSYQVKEKK HHHHCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GEARTTKDEIIQLLKVKGEHTVAELAEVLEITEMAIRRHLSNLEKDGFIYSKMVRQHVG CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC RPTYLYGLSEKGEDTFPKEYKQFAIDMLEDLARMGDEKILRYVLKERTKRMEEQLQKRVS CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC NQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNCPLKEIAERFPQVCEDEKEMY CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHH NRLFAGADVKTLANMCEGDCSCSYQVKEKK HHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA