| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ybjZ [C]
Identifier: 118480041
GI number: 118480041
Start: 4729757
End: 4732333
Strand: Reverse
Name: ybjZ [C]
Synonym: BALH_4489
Alternate gene names: 118480041
Gene position: 4732333-4729757 (Counterclockwise)
Preceding gene: 118480042
Following gene: 118480040
Centisome position: 90.02
GC content: 36.2
Gene sequence:
>2577_bases GTGATGCGATGGGTAATTAAATATGCGGTAAAATCGATGAAACAAAATTGGCTACGAAATATGTTGATCGCTCTCGGTGC AGCGTTAGGTGTTATGTTAGCGACGATGTTATTGCTAGGAAATCAATCAGTAGAGAAGAGTGTGAAGGAACAAGTAGTAA GCCGATATGGAGATTATAATTTACAATTTGGCTATATAAAAAACGATATGTATTTAAATAATGAAAGTTTAAAAGGAATA GATGGCTTAGAAAATGCTGAAAAAATATCAAAAGTACTTATACCGTATCCTTTTCCAAATTATAAAGAGCTATCAGGAAA GCCGTCCTATTGGGGTGTTGAGCAAGATTCTCCAGAAATGCATTCTTATAAAATATTAGAAGGTCGATATCCGAAAGACG GGGCTGAAGTAGCGCTGACAAAAGGGTATACAGAACGTGAAAATATACGTTTGGGAGATACGATTAAACTGCCATTCCCA CAACATGGAGAAAAGACTGTGAAAGTCGTCGGCATTTTAAATCCGCCGTTAATGGCGGCAATGGGGCATGGGGCTTATTT TCCAATCCAGTGGCTTCAAAAAGAATTAAATCTACCAAATCAGTTCAATCTCGTTCAAGTGAAAACAGCCGATGTAAATG TGAAAAGGACGATTGCTCTTGATGTAAATAAGAAGATAGAAAATATAAAGGTGGATCAACGTACTTATGTCGATAAGGCA TTTGAACGACTAAATGTAATGAAGCCTTTAATTTTTAGTTTAGGTGGTATTGCCTTATTTGTAGTAGCCCTTTTAATAAT GGGAAGTTTCTTCTTATCTGTCAGAAGTCGATTTAAGCAATGGGCATTATTACGTGCACTTGGTAGTAATCCAAATCAAA TTATATTAGTCGTTTTATTAGAGGCTTTATGTATTGGGGCAATCGGATCACTAGCAGGAGTTATTCTTGGAGCAGGTACG CAAACAATTGCAGCATCATTCATTAACAAATGGGTGAATATTGAGGGGGCAGGGGAAGCATCATTCTCGATTTCAAGTGA GATTTTACTCATTACTTTTTTACTAGGGATTGTTATGTCTATCCTAGGGGCTATTATACCAGCTTTCATGGTTAGAAAGA TTCCACCAGTTCAAGCACTCCGCCCAGGTCTTCCTAGTAATGAGAAGAAAGAAAAAAGATGGAGTGCTTTTAGCCTTAGC ATTTTACTCATTGGTACTGTTATTGGACTAGCAGGTAGCGTATTAGAGGAGTATATCGGTTTTAATCCAAGTGCGATAGG AGCGCTTTTATTTGCGGTCGGTTTGTTATTTGCGATTCCGTTATTTATTCGCGTGATAGCACCAGTGATTGCAAAACCGA TTCAAATGATATTACGAATTGAAACGACGATTAGTAGTCGGAATGTCATTCGTTATCGAAATAAGGCAGCTGTGTCGGTT GCTATACTAGCATTTGGTTTTATGTTAGCACTTGTTGGAACGATGTATGTAAACTCTATGTATGAAGGTATGAAAAAAGG ATTACAAAAACATTTACCAGCGGACTTAGTAGTAAGAATTCCAGTAGAGTCGCAAGGAATAGAAACATTACCGTTTAGTT GGATGGAGAAGATTAAAAAAATTGATGGTGTAGAGGCGAGTGTTGGGAATGCTACTGACTTTACAGCAAAGCTTGTGAAT TATGACTTTAAAAAAGCGAATCAAGAATGGTATGAATTTATGAAAAAAAACAATTTGAACTCTGATTCAATGGAAGTTGT AGGTAATGATATTGTAGCGTATCAGAAAGTAACAAAGGCGAAAGTGATTGCAGGACAAACTTTAAATAAGCCATTACAAG ATGGTGAGGGAGTCATTACGAAGGAAGTGGCTAAAAATTTAGGGCTTCAGTTGCAAGATACGTTTGAAGTAAAAGGAAAG GGAAAAGAAAAACAAACGATTAAAGTCGTTTCGATTATTGAGCAAGGATTAAGGTTAAGAGGGTTAGATGTTTTTGTAAA TGAACAATGGGCTCGCGATAAGTTTCATGTACAAGGATATGAAGCGATTCAAATTATGACAAATTCTAATCAGTCATTTG AAGCAATTAAGAAGCAAGTAAAAGAAATTACAAAGAATAAAGAGAATATAGAAGTTATAAACAGTTATGATTTATTGAAA GAACAAGAGCAGTTATTATCACAAATGATGATGTTAATTCGCTTGTTAGTTGTAATTGTTTTCATTATTTCTGGTATAGG ATTAATGAATGCGATAGTCGCAAGTTTACATGAAAGACGTGCTGAAATTAGTATGATTCGTGCGGTAGGAGCTATCCCAA AGCAAATGAGAAGGATCGTTTTATTAGAGGGAACTTTACTTGGAGCGATAGCTGGTTGCATTGGCATTTTTGGTGGGATT TTGTTTAGTTATATCGTGTTATCGAGCTTAGAGTTAACGGTTATTATTATTCCGTATAATCAAGTGGTCATACTGGCTTT AGCTAGCGTGATGCTTGGAGCGGGGGCAGCATTGATTGCGTCATTACAATTAAGAAAGTTCAAATTAAGTGATACTTTAA AAGAGTTATCAGCATAA
Upstream 100 bases:
>100_bases GAACACGCTGAAAGTAAAGGATGGAAATTTCGAAATATCCCGCAACAGGTTACTCATATTCAAGAGATTATGAATCGCCA CTTTAAAGCAGGAGGTAAAG
Downstream 100 bases:
>100_bases AAGGCCGTTACACACCACTCATACAAAGAACAAAGAAAACAAATAAAATAATGATAATACCAATGCCGAAGTTAAATACG AGAGTACTATCCATATATGT
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 858; Mature: 858
Protein sequence:
>858_residues MMRWVIKYAVKSMKQNWLRNMLIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRYGDYNLQFGYIKNDMYLNNESLKGI DGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKDGAEVALTKGYTERENIRLGDTIKLPFP QHGEKTVKVVGILNPPLMAAMGHGAYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALDVNKKIENIKVDQRTYVDKA FERLNVMKPLIFSLGGIALFVVALLIMGSFFLSVRSRFKQWALLRALGSNPNQIILVVLLEALCIGAIGSLAGVILGAGT QTIAASFINKWVNIEGAGEASFSISSEILLITFLLGIVMSILGAIIPAFMVRKIPPVQALRPGLPSNEKKEKRWSAFSLS ILLIGTVIGLAGSVLEEYIGFNPSAIGALLFAVGLLFAIPLFIRVIAPVIAKPIQMILRIETTISSRNVIRYRNKAAVSV AILAFGFMLALVGTMYVNSMYEGMKKGLQKHLPADLVVRIPVESQGIETLPFSWMEKIKKIDGVEASVGNATDFTAKLVN YDFKKANQEWYEFMKKNNLNSDSMEVVGNDIVAYQKVTKAKVIAGQTLNKPLQDGEGVITKEVAKNLGLQLQDTFEVKGK GKEKQTIKVVSIIEQGLRLRGLDVFVNEQWARDKFHVQGYEAIQIMTNSNQSFEAIKKQVKEITKNKENIEVINSYDLLK EQEQLLSQMMMLIRLLVVIVFIISGIGLMNAIVASLHERRAEISMIRAVGAIPKQMRRIVLLEGTLLGAIAGCIGIFGGI LFSYIVLSSLELTVIIIPYNQVVILALASVMLGAGAALIASLQLRKFKLSDTLKELSA
Sequences:
>Translated_858_residues MMRWVIKYAVKSMKQNWLRNMLIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRYGDYNLQFGYIKNDMYLNNESLKGI DGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKDGAEVALTKGYTERENIRLGDTIKLPFP QHGEKTVKVVGILNPPLMAAMGHGAYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALDVNKKIENIKVDQRTYVDKA FERLNVMKPLIFSLGGIALFVVALLIMGSFFLSVRSRFKQWALLRALGSNPNQIILVVLLEALCIGAIGSLAGVILGAGT QTIAASFINKWVNIEGAGEASFSISSEILLITFLLGIVMSILGAIIPAFMVRKIPPVQALRPGLPSNEKKEKRWSAFSLS ILLIGTVIGLAGSVLEEYIGFNPSAIGALLFAVGLLFAIPLFIRVIAPVIAKPIQMILRIETTISSRNVIRYRNKAAVSV AILAFGFMLALVGTMYVNSMYEGMKKGLQKHLPADLVVRIPVESQGIETLPFSWMEKIKKIDGVEASVGNATDFTAKLVN YDFKKANQEWYEFMKKNNLNSDSMEVVGNDIVAYQKVTKAKVIAGQTLNKPLQDGEGVITKEVAKNLGLQLQDTFEVKGK GKEKQTIKVVSIIEQGLRLRGLDVFVNEQWARDKFHVQGYEAIQIMTNSNQSFEAIKKQVKEITKNKENIEVINSYDLLK EQEQLLSQMMMLIRLLVVIVFIISGIGLMNAIVASLHERRAEISMIRAVGAIPKQMRRIVLLEGTLLGAIAGCIGIFGGI LFSYIVLSSLELTVIIIPYNQVVILALASVMLGAGAALIASLQLRKFKLSDTLKELSA >Mature_858_residues MMRWVIKYAVKSMKQNWLRNMLIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRYGDYNLQFGYIKNDMYLNNESLKGI DGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKDGAEVALTKGYTERENIRLGDTIKLPFP QHGEKTVKVVGILNPPLMAAMGHGAYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALDVNKKIENIKVDQRTYVDKA FERLNVMKPLIFSLGGIALFVVALLIMGSFFLSVRSRFKQWALLRALGSNPNQIILVVLLEALCIGAIGSLAGVILGAGT QTIAASFINKWVNIEGAGEASFSISSEILLITFLLGIVMSILGAIIPAFMVRKIPPVQALRPGLPSNEKKEKRWSAFSLS ILLIGTVIGLAGSVLEEYIGFNPSAIGALLFAVGLLFAIPLFIRVIAPVIAKPIQMILRIETTISSRNVIRYRNKAAVSV AILAFGFMLALVGTMYVNSMYEGMKKGLQKHLPADLVVRIPVESQGIETLPFSWMEKIKKIDGVEASVGNATDFTAKLVN YDFKKANQEWYEFMKKNNLNSDSMEVVGNDIVAYQKVTKAKVIAGQTLNKPLQDGEGVITKEVAKNLGLQLQDTFEVKGK GKEKQTIKVVSIIEQGLRLRGLDVFVNEQWARDKFHVQGYEAIQIMTNSNQSFEAIKKQVKEITKNKENIEVINSYDLLK EQEQLLSQMMMLIRLLVVIVFIISGIGLMNAIVASLHERRAEISMIRAVGAIPKQMRRIVLLEGTLLGAIAGCIGIFGGI LFSYIVLSSLELTVIIIPYNQVVILALASVMLGAGAALIASLQLRKFKLSDTLKELSA
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 94948; Mature: 94948
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRWVIKYAVKSMKQNWLRNMLIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRYGDYN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC LQFGYIKNDMYLNNESLKGIDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEM EEEEEEECCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCC HSYKILEGRYPKDGAEVALTKGYTERENIRLGDTIKLPFPQHGEKTVKVVGILNPPLMAA CCEEEECCCCCCCCCCEEEECCCCCCCCEECCCEEECCCCCCCCCEEEEEEECCCHHHHH MGHGAYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALDVNKKIENIKVDQRTYVDKA HCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCHHCCCCHHHHHHHHH FERLNVMKPLIFSLGGIALFVVALLIMGSFFLSVRSRFKQWALLRALGSNPNQIILVVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EALCIGAIGSLAGVILGAGTQTIAASFINKWVNIEGAGEASFSISSEILLITFLLGIVMS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILGAIIPAFMVRKIPPVQALRPGLPSNEKKEKRWSAFSLSILLIGTVIGLAGSVLEEYIG HHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FNPSAIGALLFAVGLLFAIPLFIRVIAPVIAKPIQMILRIETTISSRNVIRYRNKAAVSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHH AILAFGFMLALVGTMYVNSMYEGMKKGLQKHLPADLVVRIPVESQGIETLPFSWMEKIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHH IDGVEASVGNATDFTAKLVNYDFKKANQEWYEFMKKNNLNSDSMEVVGNDIVAYQKVTKA HCCCCCCCCCCHHHHHHHHHCHHHHCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH KVIAGQTLNKPLQDGEGVITKEVAKNLGLQLQDTFEVKGKGKEKQTIKVVSIIEQGLRLR HHHHCCHHCCCCCCCCCCCHHHHHHHCCCEEEECEEECCCCCCHHHHHHHHHHHHCCCEE GLDVFVNEQWARDKFHVQGYEAIQIMTNSNQSFEAIKKQVKEITKNKENIEVINSYDLLK CCEEEECCHHCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHH EQEQLLSQMMMLIRLLVVIVFIISGIGLMNAIVASLHERRAEISMIRAVGAIPKQMRRIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEGTLLGAIAGCIGIFGGILFSYIVLSSLELTVIIIPYNQVVILALASVMLGAGAALIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHH SLQLRKFKLSDTLKELSA HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMRWVIKYAVKSMKQNWLRNMLIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRYGDYN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC LQFGYIKNDMYLNNESLKGIDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEM EEEEEEECCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCC HSYKILEGRYPKDGAEVALTKGYTERENIRLGDTIKLPFPQHGEKTVKVVGILNPPLMAA CCEEEECCCCCCCCCCEEEECCCCCCCCEECCCEEECCCCCCCCCEEEEEEECCCHHHHH MGHGAYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALDVNKKIENIKVDQRTYVDKA HCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCHHCCCCHHHHHHHHH FERLNVMKPLIFSLGGIALFVVALLIMGSFFLSVRSRFKQWALLRALGSNPNQIILVVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EALCIGAIGSLAGVILGAGTQTIAASFINKWVNIEGAGEASFSISSEILLITFLLGIVMS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILGAIIPAFMVRKIPPVQALRPGLPSNEKKEKRWSAFSLSILLIGTVIGLAGSVLEEYIG HHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FNPSAIGALLFAVGLLFAIPLFIRVIAPVIAKPIQMILRIETTISSRNVIRYRNKAAVSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHH AILAFGFMLALVGTMYVNSMYEGMKKGLQKHLPADLVVRIPVESQGIETLPFSWMEKIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHH IDGVEASVGNATDFTAKLVNYDFKKANQEWYEFMKKNNLNSDSMEVVGNDIVAYQKVTKA HCCCCCCCCCCHHHHHHHHHCHHHHCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH KVIAGQTLNKPLQDGEGVITKEVAKNLGLQLQDTFEVKGKGKEKQTIKVVSIIEQGLRLR HHHHCCHHCCCCCCCCCCCHHHHHHHCCCEEEECEEECCCCCCHHHHHHHHHHHHCCCEE GLDVFVNEQWARDKFHVQGYEAIQIMTNSNQSFEAIKKQVKEITKNKENIEVINSYDLLK CCEEEECCHHCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHH EQEQLLSQMMMLIRLLVVIVFIISGIGLMNAIVASLHERRAEISMIRAVGAIPKQMRRIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEGTLLGAIAGCIGIFGGILFSYIVLSSLELTVIIIPYNQVVILALASVMLGAGAALIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHH SLQLRKFKLSDTLKELSA HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]