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The map label for this gene is rsfA [H]

Identifier: 118479558

GI number: 118479558

Start: 4193877

End: 4194533

Strand: Direct

Name: rsfA [H]

Synonym: BALH_3982

Alternate gene names: 118479558

Gene position: 4193877-4194533 (Clockwise)

Preceding gene: 162382774

Following gene: 118479570

Centisome position: 79.78

GC content: 38.2

Gene sequence:

>657_bases
ATGGAGGCTTCGCTTATGAAAACACGTCAAGATGCATGGACAAAAGAAGACGATCTCCTTTTAGCAGAAACTGTTTTACG
GCATATTCGCAGCGGCAGTACACAAATAAAAGCATTCGATGAAGTCGGCGATACATTAAATCGTACTTCAGCAGCTTGCG
GATTTAGATGGAATGCTGAAGTACGGCCGAATTACGAAGATGCGGTGCAACTTGCAAAAAAACAACGGAAAGAATTAAAG
CGCTCTGAAGCTAAAATAGAAAAAGAGCATTTCACGAAAACGAAACAACTCGTAATCGATGCTGAGTTTTCTGAAGATAT
TGCGCCAAGTAAACAAGAACTTACAATGCAAAATGTCATCTCGTTTTTGCAAAACTTAGAGCATACCAACCCTTCGCTCG
CAAAGTTACAAACTGAAAATGATGTACTACAAGCTCAGCTCACTTCCTTGCAAAAAACGAATGATGAGCTTGAAACTAAA
TTAGCCGTACTCACAAAAAAACAACAAGCAATCGAAGAAGATTACGCAATGCTTGTTAGAATTATGGACCGTGCTCGAAA
ACTCGTTTCAGTCGAAGAACAAGAAGAGCAAATTGCTCCAATTTTCAAAACAGATCAAAATGGAAATTTAGATATTATAT
ATTCTGCAGAGAATTAA

Upstream 100 bases:

>100_bases
CAGGAAAATTTGAGCAAGCACTTTCTACTGTATATGAAAGATTACAAAGTTCGAATAAAACGAAAAAATAAAGGGTAACA
TAAGCGAAAACGTCACCATT

Downstream 100 bases:

>100_bases
AAACAGGGCTGTCACTTTTTTCACTAAGTGACAGCCCTGTTTGTTTCTTTGGTGGAGAGTATATATGTATGTGTGTCGGT
AAATGAAATCATACCGAAGA

Product: prespore-specific transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MEASLMKTRQDAWTKEDDLLLAETVLRHIRSGSTQIKAFDEVGDTLNRTSAACGFRWNAEVRPNYEDAVQLAKKQRKELK
RSEAKIEKEHFTKTKQLVIDAEFSEDIAPSKQELTMQNVISFLQNLEHTNPSLAKLQTENDVLQAQLTSLQKTNDELETK
LAVLTKKQQAIEEDYAMLVRIMDRARKLVSVEEQEEQIAPIFKTDQNGNLDIIYSAEN

Sequences:

>Translated_218_residues
MEASLMKTRQDAWTKEDDLLLAETVLRHIRSGSTQIKAFDEVGDTLNRTSAACGFRWNAEVRPNYEDAVQLAKKQRKELK
RSEAKIEKEHFTKTKQLVIDAEFSEDIAPSKQELTMQNVISFLQNLEHTNPSLAKLQTENDVLQAQLTSLQKTNDELETK
LAVLTKKQQAIEEDYAMLVRIMDRARKLVSVEEQEEQIAPIFKTDQNGNLDIIYSAEN
>Mature_218_residues
MEASLMKTRQDAWTKEDDLLLAETVLRHIRSGSTQIKAFDEVGDTLNRTSAACGFRWNAEVRPNYEDAVQLAKKQRKELK
RSEAKIEKEHFTKTKQLVIDAEFSEDIAPSKQELTMQNVISFLQNLEHTNPSLAKLQTENDVLQAQLTSLQKTNDELETK
LAVLTKKQQAIEEDYAMLVRIMDRARKLVSVEEQEEQIAPIFKTDQNGNLDIIYSAEN

Specific function: Seems to improve the efficiency of sporulation by fine- tuning the expression of genes in the sigma F regulon, particularly the timing of their expression. Negatively regulates spoIIR and its own synthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Myb-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014243
- InterPro:   IPR017877 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24982; Mature: 24982

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASLMKTRQDAWTKEDDLLLAETVLRHIRSGSTQIKAFDEVGDTLNRTSAACGFRWNAE
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCEECCC
VRPNYEDAVQLAKKQRKELKRSEAKIEKEHFTKTKQLVIDAEFSEDIAPSKQELTMQNVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
SFLQNLEHTNPSLAKLQTENDVLQAQLTSLQKTNDELETKLAVLTKKQQAIEEDYAMLVR
HHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDRARKLVSVEEQEEQIAPIFKTDQNGNLDIIYSAEN
HHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCC
>Mature Secondary Structure
MEASLMKTRQDAWTKEDDLLLAETVLRHIRSGSTQIKAFDEVGDTLNRTSAACGFRWNAE
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCEECCC
VRPNYEDAVQLAKKQRKELKRSEAKIEKEHFTKTKQLVIDAEFSEDIAPSKQELTMQNVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
SFLQNLEHTNPSLAKLQTENDVLQAQLTSLQKTNDELETKLAVLTKKQQAIEEDYAMLVR
HHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDRARKLVSVEEQEEQIAPIFKTDQNGNLDIIYSAEN
HHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 10629188 [H]