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The map label for this gene is recO [H]

Identifier: 118479468

GI number: 118479468

Start: 4100648

End: 4101421

Strand: Reverse

Name: recO [H]

Synonym: BALH_3889

Alternate gene names: 118479468

Gene position: 4101421-4100648 (Counterclockwise)

Preceding gene: 118479469

Following gene: 118479467

Centisome position: 78.02

GC content: 36.43

Gene sequence:

>774_bases
TTGTTCAAACCTTGGATGGTGACGAACATGTTTCAAAAAGTTGAGGGCATCGTTATCCGTACGACAGATTACGGAGAAAC
GAACAAGATTGTTACAATATTTTCAAGAGAATTGGGTAAGGTAAGCGCAATGGCAAGAGGAGCGAAAAAACCGAAAAGCC
GGTTAGCATCTGTTTCGCAACTTATGACACATGGTCATTTTCTTATTCAAATGGGATCTGGACTTGGAACTTTGCAACAA
GGCGAGATTATTTCAACTATGAAAGAAATTCGCGAGGATATATTTTTAACTGCTTATGCATCATTTATTGTTGAATTAAC
TGATAAAGCAACAGAAGATAAAAAACATAATCCATATTTATTTGAAATGTTATATCAAACGTTGCATTATATGTGTGAGG
GTGTTGATCCGGAAGTATTATCATTAATTTATCAAACGAAAATGCTTCCGGTATTAGGGATGCGCCCGTACTTTGACACA
TGTGCGATTTGTCATCAAGAAACAGATTTTGTCGCCTTCTCTGTTAGAGAGGGCGGTTTTCTGTGCTCACGTCATGCTGA
GCAAGATCAGTATCGTATACCAGTGGGGGAAGCCGTTCATAAATTATTGCGTCTTTTCTACCACTTCGATTTACATAGAC
TTGGCAATGTATCAGTGAAGGATAGCACAAAAAAACAAATGCGTTTAGTATTGAATACATATTATGATGAATATTGCGGG
ATTTATTTGAAATCAAGACGTTTCTTAGAACAACTTGATAAGTTTCAAATATAA

Upstream 100 bases:

>100_bases
GTATTTGCTTTTGAAAGAAATGGAAAAAGACGTAAACGATGAGATGGATCAACATGAAGAGGAGCTAGCGCATCTAGACT
CTCCAATTTCTTGACCCGTT

Downstream 100 bases:

>100_bases
TTTGGGGCCGTATACGGTCCTTTTTACATCCTTTCTTTTTCGAATAGCATATTTAGTATATAATATTTAAGAGATAGTAT
AACTTTTTTCGTTGTGCATT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MFKPWMVTNMFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLIQMGSGLGTLQQ
GEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDT
CAICHQETDFVAFSVREGGFLCSRHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCG
IYLKSRRFLEQLDKFQI

Sequences:

>Translated_257_residues
MFKPWMVTNMFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLIQMGSGLGTLQQ
GEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDT
CAICHQETDFVAFSVREGGFLCSRHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCG
IYLKSRRFLEQLDKFQI
>Mature_257_residues
MFKPWMVTNMFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLIQMGSGLGTLQQ
GEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDT
CAICHQETDFVAFSVREGGFLCSRHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCG
IYLKSRRFLEQLDKFQI

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 29801; Mature: 29801

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPWMVTNMFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQ
CCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHH
LMTHGHFLIQMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYL
HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
FEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCE
LCSRHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCG
EECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IYLKSRRFLEQLDKFQI
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKPWMVTNMFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQ
CCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHH
LMTHGHFLIQMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYL
HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
FEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCE
LCSRHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCG
EECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IYLKSRRFLEQLDKFQI
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA