| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ispH [H]
Identifier: 118479460
GI number: 118479460
Start: 4091511
End: 4092461
Strand: Direct
Name: ispH [H]
Synonym: BALH_3881
Alternate gene names: 118479460
Gene position: 4091511-4092461 (Clockwise)
Preceding gene: 118479459
Following gene: 118479489
Centisome position: 77.83
GC content: 37.64
Gene sequence:
>951_bases ATGAAAATTGTTAAAATTTCCCCTCGTGGTTATTGCTACGGTGTTGTGGACGCGATGGTTATTGCACGTAACGCCGCATT AGATACATCATTACCAAGACCTATTTATATTTTAGGTATGATTGTTCACAACAAACATGTAACAGATGCATTCGAAGAAG ATGGTATCATTACATTAGACGGTCCAAGTCGATTAGACATTTTAGATAAAATCGATTCTGGTACTGTTATTTTCACTGCA CACGGTGTTTCTCCAGAAGTTAAACAGCGTGCAAAAGAAAAAGGTTTAACAACCATCGATGCCACTTGCCCAGATGTTAC AAAAACACATGACCTTATTGAAGCAAAGAAAGCTGAAGGTTACCATGTCATTTATATCGGCAAAAAAAATCATCCAGAAC CAGAAGGCGCCGTTGGTATTGCACCTGATATCGTTCATCTTATTGAAAAAGCTGATGATTTAAAAACATTAGAAATTCCA ACGAATAAAATTTTAGTTACAAATCAAACAACGATGAGTCAATGGGATGTGCAACATTTAATGGAGGACATTCAGAAAAA ATTCCCAACAGCAGAGTTCCATAAGGAAATTTGTTTAGCAACTCAAGTTCGCCAAGAAGCTGTTGCCAAACAAGCTGATG TTGCCGACTTAACAATTGTTGTTGGTGATCCGAAAAGTAACAACTCAAACCGTTTAGCACAAGTATCACAAGAAATCGCT GGTACGAAGGCATACCGCGTTGCAGACGTAAGTGAAATTAAATTAGAATGGTTACAAGGTGTAGAAAACGTAGCTGTTAC AGCAGGTGCTTCTACTCCAACACCAATTACAAAAGAGGTTATCGCTTTCTTAGAGCAATATGACCCAATGAATCCCGCTA CATGGGAGAGAGTTCGAAAAGTACCGTTACAAAAAATATTACCTCGTGTAAAAGTGAAAAAAGAACAATAA
Upstream 100 bases:
>100_bases TATATGTGTAACAATCCTTTGTTTTCTATCCACTCCTCCTTTATAATGTAAAAGACTATGCACAAAAGTATCCCTTGTTT AGAAGGAGAGGATTACTCAT
Downstream 100 bases:
>100_bases TAAAAACCGTTGCCTATATGAGCAACGGTTTTTATTTTTCTTATACAAATGTAAATGGATCTGTATGTAACTGCGAAGCA TGAATGTTTACATTAAGTTT
Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKIVKISPRGYCYGVVDAMVIARNAALDTSLPRPIYILGMIVHNKHVTDAFEEDGIITLDGPSRLDILDKIDSGTVIFTA HGVSPEVKQRAKEKGLTTIDATCPDVTKTHDLIEAKKAEGYHVIYIGKKNHPEPEGAVGIAPDIVHLIEKADDLKTLEIP TNKILVTNQTTMSQWDVQHLMEDIQKKFPTAEFHKEICLATQVRQEAVAKQADVADLTIVVGDPKSNNSNRLAQVSQEIA GTKAYRVADVSEIKLEWLQGVENVAVTAGASTPTPITKEVIAFLEQYDPMNPATWERVRKVPLQKILPRVKVKKEQ
Sequences:
>Translated_316_residues MKIVKISPRGYCYGVVDAMVIARNAALDTSLPRPIYILGMIVHNKHVTDAFEEDGIITLDGPSRLDILDKIDSGTVIFTA HGVSPEVKQRAKEKGLTTIDATCPDVTKTHDLIEAKKAEGYHVIYIGKKNHPEPEGAVGIAPDIVHLIEKADDLKTLEIP TNKILVTNQTTMSQWDVQHLMEDIQKKFPTAEFHKEICLATQVRQEAVAKQADVADLTIVVGDPKSNNSNRLAQVSQEIA GTKAYRVADVSEIKLEWLQGVENVAVTAGASTPTPITKEVIAFLEQYDPMNPATWERVRKVPLQKILPRVKVKKEQ >Mature_316_residues MKIVKISPRGYCYGVVDAMVIARNAALDTSLPRPIYILGMIVHNKHVTDAFEEDGIITLDGPSRLDILDKIDSGTVIFTA HGVSPEVKQRAKEKGLTTIDATCPDVTKTHDLIEAKKAEGYHVIYIGKKNHPEPEGAVGIAPDIVHLIEKADDLKTLEIP TNKILVTNQTTMSQWDVQHLMEDIQKKFPTAEFHKEICLATQVRQEAVAKQADVADLTIVVGDPKSNNSNRLAQVSQEIA GTKAYRVADVSEIKLEWLQGVENVAVTAGASTPTPITKEVIAFLEQYDPMNPATWERVRKVPLQKILPRVKVKKEQ
Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]
COG id: COG0761
COG function: function code IM; Penicillin tolerance protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispH family [H]
Homologues:
Organism=Escherichia coli, GI1786212, Length=292, Percent_Identity=38.013698630137, Blast_Score=184, Evalue=9e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003451 [H]
Pfam domain/function: PF02401 LYTB [H]
EC number: =1.17.1.2 [H]
Molecular weight: Translated: 34939; Mature: 34939
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVKISPRGYCYGVVDAMVIARNAALDTSLPRPIYILGMIVHNKHVTDAFEEDGIITLD CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHCCCEEEEC GPSRLDILDKIDSGTVIFTAHGVSPEVKQRAKEKGLTTIDATCPDVTKTHDLIEAKKAEG CCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCC YHVIYIGKKNHPEPEGAVGIAPDIVHLIEKADDLKTLEIPTNKILVTNQTTMSQWDVQHL EEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHH MEDIQKKFPTAEFHKEICLATQVRQEAVAKQADVADLTIVVGDPKSNNSNRLAQVSQEIA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH GTKAYRVADVSEIKLEWLQGVENVAVTAGASTPTPITKEVIAFLEQYDPMNPATWERVRK CCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH VPLQKILPRVKVKKEQ CCHHHHCCCCCCCCCC >Mature Secondary Structure MKIVKISPRGYCYGVVDAMVIARNAALDTSLPRPIYILGMIVHNKHVTDAFEEDGIITLD CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHCCCEEEEC GPSRLDILDKIDSGTVIFTAHGVSPEVKQRAKEKGLTTIDATCPDVTKTHDLIEAKKAEG CCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCC YHVIYIGKKNHPEPEGAVGIAPDIVHLIEKADDLKTLEIPTNKILVTNQTTMSQWDVQHL EEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHH MEDIQKKFPTAEFHKEICLATQVRQEAVAKQADVADLTIVVGDPKSNNSNRLAQVSQEIA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH GTKAYRVADVSEIKLEWLQGVENVAVTAGASTPTPITKEVIAFLEQYDPMNPATWERVRK CCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH VPLQKILPRVKVKKEQ CCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA