| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is comGB [H]
Identifier: 118479420
GI number: 118479420
Start: 4047369
End: 4048406
Strand: Reverse
Name: comGB [H]
Synonym: BALH_3840
Alternate gene names: 118479420
Gene position: 4048406-4047369 (Counterclockwise)
Preceding gene: 118479421
Following gene: 118479419
Centisome position: 77.01
GC content: 32.37
Gene sequence:
>1038_bases ATGTTTATGTTTAAGGAAATATGGAGTTTAAGTGATCAAGTCATATTACTGAAACGATTAGGAGAACTATTAGAAAAAGG ATACTCCCTTTTGCAGGCATTAGAATTTTTACGGTTTCAATTACCTTTAGAAAAGAAAGTACAATTGCAGCGCATGATTG ATGGGTTGAAAGATGGAAAAAGTTTACATGACTCTTTTCATCAATTAAAGTTCCATCAGGAGATGTTAAGCTATTTATTT TATGCTGAACAGCATGGTGATATTTCTTTTGCCTTGCAACAAGGGAGTGCACTTCTTTATAAAAAGGATAAGTATAGGAA AGATATGATAAAAATAATGCAGTATCCTATGTTTTTAGCGATTTTTTTAATAATCATGATTTTGATTTTTAACCGTATTT TATTACCACAGGTTGATATGGTATATAGTTCATTTGGTTCTACAGCACCGTTATTCACAGAACAAATATTAAGTACAATT AAGTTACTCCCCTACCTTATTATTAGTACCCTTTTTATCATTATGATTGTATTTGGTGTATATATAGTTTACTTTCGGAA ACTCCCACATATGAAGCAGGTGAAAATTATACTTCGTATCCCCCTCGTAAAAACATTTCTTATTTTAAAGCATTCGCATT ATTTCGCCACTCAATTGAGCGGTTTATTACACGGTGGATTATCAGTACTTGAGGCTCTAACAATAATGATGGAGCAAAAA TATCATCCGTTCTTTCAATATGAAGCGGGTCGAATTGAGCGCCAATTAATTGCGGGAGAACCGTTGCAATCTATTATTGC TAAAAGCGGATATTATGAGGAAGAACTTTCTTATATTATTACACATGGACAAGCAAACGGTAATTTGGCGATTGAATTAG GTGACTATAGCGATCTTATTATGGAAAAGATGGAGCAAAAAATAAAACGTATGTTGGTGATTATTCAACCGATTTTATTT ACGTGTATTGGAGGAATAGTTGTTCTTATGTATTTAGCGATGATTATGCCAATGTTTCAAATGATGAATTCTATATAG
Upstream 100 bases:
>100_bases CAAGCGATTAAAGAAGCAAACGGGGAATGTGTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGC TTTAGGGTTTTTAGAAGAAG
Downstream 100 bases:
>100_bases GAGGCATTTACATGCAGAATGAGGAAGGGTTTACCCTTTTAGAAATGTTATTAGTTATGGTCGTCATAACTGTATTATTA CTATTAATTATTCCTAATGT
Product: comG operon protein 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MFMFKEIWSLSDQVILLKRLGELLEKGYSLLQALEFLRFQLPLEKKVQLQRMIDGLKDGKSLHDSFHQLKFHQEMLSYLF YAEQHGDISFALQQGSALLYKKDKYRKDMIKIMQYPMFLAIFLIIMILIFNRILLPQVDMVYSSFGSTAPLFTEQILSTI KLLPYLIISTLFIIMIVFGVYIVYFRKLPHMKQVKIILRIPLVKTFLILKHSHYFATQLSGLLHGGLSVLEALTIMMEQK YHPFFQYEAGRIERQLIAGEPLQSIIAKSGYYEEELSYIITHGQANGNLAIELGDYSDLIMEKMEQKIKRMLVIIQPILF TCIGGIVVLMYLAMIMPMFQMMNSI
Sequences:
>Translated_345_residues MFMFKEIWSLSDQVILLKRLGELLEKGYSLLQALEFLRFQLPLEKKVQLQRMIDGLKDGKSLHDSFHQLKFHQEMLSYLF YAEQHGDISFALQQGSALLYKKDKYRKDMIKIMQYPMFLAIFLIIMILIFNRILLPQVDMVYSSFGSTAPLFTEQILSTI KLLPYLIISTLFIIMIVFGVYIVYFRKLPHMKQVKIILRIPLVKTFLILKHSHYFATQLSGLLHGGLSVLEALTIMMEQK YHPFFQYEAGRIERQLIAGEPLQSIIAKSGYYEEELSYIITHGQANGNLAIELGDYSDLIMEKMEQKIKRMLVIIQPILF TCIGGIVVLMYLAMIMPMFQMMNSI >Mature_345_residues MFMFKEIWSLSDQVILLKRLGELLEKGYSLLQALEFLRFQLPLEKKVQLQRMIDGLKDGKSLHDSFHQLKFHQEMLSYLF YAEQHGDISFALQQGSALLYKKDKYRKDMIKIMQYPMFLAIFLIIMILIFNRILLPQVDMVYSSFGSTAPLFTEQILSTI KLLPYLIISTLFIIMIVFGVYIVYFRKLPHMKQVKIILRIPLVKTFLILKHSHYFATQLSGLLHGGLSVLEALTIMMEQK YHPFFQYEAGRIERQLIAGEPLQSIIAKSGYYEEELSYIITHGQANGNLAIELGDYSDLIMEKMEQKIKRMLVIIQPILF TCIGGIVVLMYLAMIMPMFQMMNSI
Specific function: Required for transformation and DNA binding [H]
COG id: COG1459
COG function: function code NU; Type II secretory pathway, component PulF
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP F family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018076 - InterPro: IPR001992 [H]
Pfam domain/function: PF00482 GSPII_F [H]
EC number: NA
Molecular weight: Translated: 40198; Mature: 40198
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMFKEIWSLSDQVILLKRLGELLEKGYSLLQALEFLRFQLPLEKKVQLQRMIDGLKDGK CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH SLHDSFHQLKFHQEMLSYLFYAEQHGDISFALQQGSALLYKKDKYRKDMIKIMQYPMFLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHH IFLIIMILIFNRILLPQVDMVYSSFGSTAPLFTEQILSTIKLLPYLIISTLFIIMIVFGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIVYFRKLPHMKQVKIILRIPLVKTFLILKHSHYFATQLSGLLHGGLSVLEALTIMMEQK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHPFFQYEAGRIERQLIAGEPLQSIIAKSGYYEEELSYIITHGQANGNLAIELGDYSDLI CCCHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHEECCCCCCEEEEECCHHHHH MEKMEQKIKRMLVIIQPILFTCIGGIVVLMYLAMIMPMFQMMNSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFMFKEIWSLSDQVILLKRLGELLEKGYSLLQALEFLRFQLPLEKKVQLQRMIDGLKDGK CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH SLHDSFHQLKFHQEMLSYLFYAEQHGDISFALQQGSALLYKKDKYRKDMIKIMQYPMFLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHH IFLIIMILIFNRILLPQVDMVYSSFGSTAPLFTEQILSTIKLLPYLIISTLFIIMIVFGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIVYFRKLPHMKQVKIILRIPLVKTFLILKHSHYFATQLSGLLHGGLSVLEALTIMMEQK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHPFFQYEAGRIERQLIAGEPLQSIIAKSGYYEEELSYIITHGQANGNLAIELGDYSDLI CCCHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHEECCCCCCEEEEECCHHHHH MEKMEQKIKRMLVIIQPILFTCIGGIVVLMYLAMIMPMFQMMNSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2507524; 8969508; 9384377; 9422590 [H]