BacMap

Definition	Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession	NC_008600
Length	5,257,091

Click here to switch to the map view.

The map label for this gene is ytrB [H]

Identifier: 118479405

GI number: 118479405

Start: 4033389

End: 4034261

Strand: Reverse

Name: ytrB [H]

Synonym: BALH_3824

Alternate gene names: 118479405

Gene position: 4034261-4033389 (Counterclockwise)

Preceding gene: 118479406

Following gene: 118479404

Centisome position: 76.74

GC content: 33.22

Gene sequence:

>873_bases
ATGTTAGAGCTAAAAAACGTTTGTAAAAGTTATGAAGATTTTGCAGTGAAAAATATAAGTTTTACGTTACCACGCGGATA
TATTATGGGATTTGTCGGACCGAATGGGGCCGGGAAAAGTACGACAATCAAAATGATTATGAATTTAATTAAAAAAGATA
GCGGCGAAATAAAAATTTTTGGCAAGGACAATAAGAAAGCCGAAAAGGAAATAAAACAAAATATCGGATTTGTATATGAT
GAAAATCATTATTACGAAGATTTAACGTGTGAACAAATGAAACGTATTATTGCACCGTTATATAAAAAGTGGGATGAAAA
GCAGTATCAATCGTATATGCATAGATTGCAAGTTCCGAAGTATAAAAAAATTAAAGAATTATCAAAAGGAATGAAAATGA
AATTTGCGATTGCCATCGCGCTCTCGCACCACGCAGAATTTATCATCATGGATGAACCAACAGCAGGATTAGATCCAGTT
GTTCGAAGTGAATTACTTGATATGTTGCAAGAAATTGTAATGGAAGATGAAGTATCGGTATTATTCTCAACGCACATTAC
AACAGATTTAGAGCGCATTGCAGATTATATTACGTTTATCAACGATGGAGAAATTATATTTACTGGTGAAAAAGAAGACT
TGATGGAGAACTACGTAATCGTAAAAGGAAGTAATGATTTATTAGATCGAGAAGGAAAAGAACTATTTGTTGGATTACGA
AAAAATAAATTTGGTTTTGAAGGTTTAGCGAAGGATAAACAAGCAATTATTGACTGGTTTGGAAATGAGGTTGTACTAGA
AAAGCCTACATTAGATGATATTATCGTTTACACCGCGAAAGGGAGAAGTGCCTATGCGTCAGCTAATCTATAA

Upstream 100 bases:

>100_bases
AAGTAAAGCGGAAGAGATTGTGAATGAAAGTAAAGCGTTGCAGCTTTCACTTGAAGATTTACAGCAGATGATAGCGTGTT
TATATGAGGGGGAATAAAGG

Downstream 100 bases:

>100_bases
AGATTTGTTCTTTTTTCGGGTTATGTGGTTAGTGTATTTTATTATGCCCCTTGTTTTCTTTGGATTAGATCCAGATGGTG
AATTGTTATTTCCAATGAGT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD
ENHYYEDLTCEQMKRIIAPLYKKWDEKQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV
VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKEDLMENYVIVKGSNDLLDREGKELFVGLR
KNKFGFEGLAKDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRSAYASANL

Sequences:

>Translated_290_residues
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD
ENHYYEDLTCEQMKRIIAPLYKKWDEKQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV
VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKEDLMENYVIVKGSNDLLDREGKELFVGLR
KNKFGFEGLAKDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRSAYASANL
>Mature_290_residues
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD
ENHYYEDLTCEQMKRIIAPLYKKWDEKQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV
VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKEDLMENYVIVKGSNDLLDREGKELFVGLR
KNKFGFEGLAKDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRSAYASANL

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=225, Percent_Identity=29.7777777777778, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI30795238, Length=225, Percent_Identity=29.7777777777778, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI21536376, Length=220, Percent_Identity=30.4545454545455, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=29.6650717703349, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=29.6650717703349, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI27436953, Length=209, Percent_Identity=26.7942583732057, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI105990541, Length=214, Percent_Identity=28.0373831775701, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI31657092, Length=224, Percent_Identity=27.6785714285714, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI153792144, Length=243, Percent_Identity=26.3374485596708, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI27477115, Length=226, Percent_Identity=26.5486725663717, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI6005701, Length=226, Percent_Identity=25.6637168141593, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI150417984, Length=202, Percent_Identity=26.2376237623762, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI27262624, Length=220, Percent_Identity=24.0909090909091, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI27262626, Length=220, Percent_Identity=24.0909090909091, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI21536378, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI9955963, Length=234, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9961252, Length=238, Percent_Identity=25.6302521008403, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI9961250, Length=238, Percent_Identity=25.6302521008403, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI4505771, Length=238, Percent_Identity=25.6302521008403, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI9665248, Length=257, Percent_Identity=23.3463035019455, Blast_Score=68, Evalue=8e-12,
Organism=Escherichia coli, GI87081782, Length=220, Percent_Identity=32.7272727272727, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI48994943, Length=221, Percent_Identity=28.9592760180996, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=31.1320754716981, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=29.8245614035088, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=31.1926605504587, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786253, Length=223, Percent_Identity=26.457399103139, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787759, Length=243, Percent_Identity=27.1604938271605, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789890, Length=228, Percent_Identity=27.6315789473684, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787089, Length=226, Percent_Identity=26.1061946902655, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788450, Length=218, Percent_Identity=25.2293577981651, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=25, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1788506, Length=211, Percent_Identity=29.3838862559242, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=26.1682242990654, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=28.099173553719, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786803, Length=215, Percent_Identity=22.7906976744186, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=25.974025974026, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI48995001, Length=211, Percent_Identity=31.2796208530806, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI48994997, Length=235, Percent_Identity=24.6808510638298, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=25.1101321585903, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081834, Length=206, Percent_Identity=28.6407766990291, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787105, Length=224, Percent_Identity=27.6785714285714, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=24.8888888888889, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=25.5707762557078, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788540, Length=218, Percent_Identity=29.3577981651376, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786872, Length=221, Percent_Identity=29.8642533936652, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787547, Length=250, Percent_Identity=25.6, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787548, Length=227, Percent_Identity=25.1101321585903, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790739, Length=230, Percent_Identity=23.0434782608696, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI2367384, Length=216, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789586, Length=218, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790190, Length=232, Percent_Identity=26.2931034482759, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789962, Length=217, Percent_Identity=26.7281105990783, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786975, Length=217, Percent_Identity=27.6497695852535, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=210, Percent_Identity=23.8095238095238, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786698, Length=190, Percent_Identity=26.8421052631579, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790525, Length=219, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787712, Length=221, Percent_Identity=23.9819004524887, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=21.5189873417722, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786345, Length=235, Percent_Identity=22.1276595744681, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=27.1276595744681, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790162, Length=240, Percent_Identity=23.3333333333333, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=24.2152466367713, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788897, Length=206, Percent_Identity=25.7281553398058, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788472, Length=221, Percent_Identity=25.7918552036199, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082268, Length=228, Percent_Identity=20.6140350877193, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787500, Length=217, Percent_Identity=23.0414746543779, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=22.4137931034483, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788210, Length=218, Percent_Identity=26.1467889908257, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=210, Percent_Identity=24.2857142857143, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994883, Length=222, Percent_Identity=23.8738738738739, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=212, Percent_Identity=30.6603773584906, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71983510, Length=212, Percent_Identity=30.6603773584906, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71983516, Length=212, Percent_Identity=30.6603773584906, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17510237, Length=225, Percent_Identity=28.4444444444444, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=28.0373831775701, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI115533608, Length=222, Percent_Identity=27.9279279279279, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI193202878, Length=189, Percent_Identity=26.4550264550265, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193208177, Length=213, Percent_Identity=27.6995305164319, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323959, Length=217, Percent_Identity=28.110599078341, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666092, Length=200, Percent_Identity=29.5, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI221512771, Length=215, Percent_Identity=30.2325581395349, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24582014, Length=238, Percent_Identity=26.4705882352941, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24582012, Length=238, Percent_Identity=26.4705882352941, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24650855, Length=213, Percent_Identity=27.2300469483568, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24650853, Length=213, Percent_Identity=27.2300469483568, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI281362751, Length=213, Percent_Identity=27.2300469483568, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI85725262, Length=211, Percent_Identity=27.4881516587678, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24643674, Length=239, Percent_Identity=25.9414225941423, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI116007328, Length=204, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28574150, Length=204, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI221500365, Length=204, Percent_Identity=24.0196078431373, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI116007184, Length=204, Percent_Identity=24.0196078431373, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28573571, Length=230, Percent_Identity=24.7826086956522, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28573573, Length=222, Percent_Identity=25.2252252252252, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24648314, Length=215, Percent_Identity=26.9767441860465, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28574744, Length=202, Percent_Identity=24.2574257425743, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221500419, Length=209, Percent_Identity=24.4019138755981, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281363262, Length=213, Percent_Identity=25.8215962441315, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=213, Percent_Identity=25.8215962441315, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357907, Length=232, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85726357, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33274; Mature: 33274

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIF
CCCHHHHHHHHHHHHECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE
GKDNKKAEKEIKQNIGFVYDENHYYEDLTCEQMKRIIAPLYKKWDEKQYQSYMHRLQVPK
ECCCHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
YKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPVVRSELLDMLQEIVMEDEVSV
HHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LFSTHITTDLERIADYITFINDGEIIFTGEKEDLMENYVIVKGSNDLLDREGKELFVGLR
HHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHCEEEEECCCHHHCCCCCEEEEEEC
KNKFGFEGLAKDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRSAYASANL
CCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIF
CCCHHHHHHHHHHHHECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE
GKDNKKAEKEIKQNIGFVYDENHYYEDLTCEQMKRIIAPLYKKWDEKQYQSYMHRLQVPK
ECCCHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
YKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPVVRSELLDMLQEIVMEDEVSV
HHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LFSTHITTDLERIADYITFINDGEIIFTGEKEDLMENYVIVKGSNDLLDREGKELFVGLR
HHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHCEEEEECCCHHHCCCCCEEEEEEC
KNKFGFEGLAKDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRSAYASANL
CCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]