| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yqhR [H]
Identifier: 118479389
GI number: 118479389
Start: 4019385
End: 4019891
Strand: Reverse
Name: yqhR [H]
Synonym: BALH_3806
Alternate gene names: 118479389
Gene position: 4019891-4019385 (Counterclockwise)
Preceding gene: 118479391
Following gene: 118479388
Centisome position: 76.47
GC content: 36.49
Gene sequence:
>507_bases TTGAGCGGAGGTGTCGATGTGAGTCAAGAACAATTAGGAACAAGGAATTTTGTGCAAATTGGTTTATTTGGTGGACTTTT TTGGGGAGGGATATGGTATTTCCTTCATATATTTTCATTTACAGAAGCGGGACCGAATTATTTACTATTACCATTTGCCT TTGGAAGCTGGAAAGAAGGGGTATGGGGTAATGTGTTGGGAATTGTTTGTATGGCACTACTTTCAATTTTAATTGCCTTT TTGTATAAAGCGTTTTTGGCAAAATTTGAAGGGATTCTTCCAGGGATGATTTATGGTCTATTTTGGTGGGCGTTACTATT TTTCGGAGTAGGGTTAATAGCACCTGCTATTAAAAGTGCACTCCATTTACCGAAAGAAACAATTGTGACGACAATATGCA TCTTTATATTATATGGTGTGTTTATAGCATACTCTGTTTCCTACGCAGTAAATACAAATAAAGCTGAGCGAGAAGGAGAA GAGAAGACAAACTATTCAAATAAGTAA
Upstream 100 bases:
>100_bases TGACAAGGGAAAATGTTACGAGAGTCGGACATTTCTTATTCTTTTTATAGACAAATTTCGCAGTATTTAAACATGGTTCA AAATAGTTTCGGGCATACTA
Downstream 100 bases:
>100_bases CTCCTATGTTAAAATGGTATATAGATCTTTAATATTAAGGAGTTTTAAGCATATGAAAAAGGTACTCCTCGTAAACGGTC CTAACCTAAATCGCCTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSGGVDVSQEQLGTRNFVQIGLFGGLFWGGIWYFLHIFSFTEAGPNYLLLPFAFGSWKEGVWGNVLGIVCMALLSILIAF LYKAFLAKFEGILPGMIYGLFWWALLFFGVGLIAPAIKSALHLPKETIVTTICIFILYGVFIAYSVSYAVNTNKAEREGE EKTNYSNK
Sequences:
>Translated_168_residues MSGGVDVSQEQLGTRNFVQIGLFGGLFWGGIWYFLHIFSFTEAGPNYLLLPFAFGSWKEGVWGNVLGIVCMALLSILIAF LYKAFLAKFEGILPGMIYGLFWWALLFFGVGLIAPAIKSALHLPKETIVTTICIFILYGVFIAYSVSYAVNTNKAEREGE EKTNYSNK >Mature_167_residues SGGVDVSQEQLGTRNFVQIGLFGGLFWGGIWYFLHIFSFTEAGPNYLLLPFAFGSWKEGVWGNVLGIVCMALLSILIAFL YKAFLAKFEGILPGMIYGLFWWALLFFGVGLIAPAIKSALHLPKETIVTTICIFILYGVFIAYSVSYAVNTNKAEREGEE KTNYSNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18674; Mature: 18543
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGVDVSQEQLGTRNFVQIGLFGGLFWGGIWYFLHIFSFTEAGPNYLLLPFAFGSWKEG CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC VWGNVLGIVCMALLSILIAFLYKAFLAKFEGILPGMIYGLFWWALLFFGVGLIAPAIKSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHLPKETIVTTICIFILYGVFIAYSVSYAVNTNKAEREGEEKTNYSNK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCC >Mature Secondary Structure SGGVDVSQEQLGTRNFVQIGLFGGLFWGGIWYFLHIFSFTEAGPNYLLLPFAFGSWKEG CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC VWGNVLGIVCMALLSILIAFLYKAFLAKFEGILPGMIYGLFWWALLFFGVGLIAPAIKSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHLPKETIVTTICIFILYGVFIAYSVSYAVNTNKAEREGEEKTNYSNK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]