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The map label for this gene is yqjB [H]

Identifier: 118479343

GI number: 118479343

Start: 3974403

End: 3974969

Strand: Reverse

Name: yqjB [H]

Synonym: BALH_3760

Alternate gene names: 118479343

Gene position: 3974969-3974403 (Counterclockwise)

Preceding gene: 118479344

Following gene: 118479342

Centisome position: 75.61

GC content: 36.86

Gene sequence:

>567_bases
TTGTTTATGCCGTATCTTCTCTCTTTCATATTATGTCTTTCTTTATCGCCTATTTGGCCTCTTGGTGATAATCCGCGTGC
CGGTGATCCTTTCATTATTGTAAATAAAGCGACGAATAAACTAGCTTATATTGACGATGGAAAGATTCAAAAGGTTTTTC
CAGTCGCTACAGGGAAAACAAATGAATTAACCCCAGAGGGAACTTTTGATATTGTAATGAAAGCAAAGGACCCATATTAT
ATTGCGAAGAATATTCCTGGGGGATCACCGAAAAATCCACTTGGATCTAGGTGGATGGGGTTTAATGCAAGAGGAACGGA
TGGAAGTAAATATGGAATACATGGAACGAACCAACCGAGTTCAATTGGAAAGTATATTTCACAAGGATGTATAAGAATGA
AGAAAAACGATGTGGAGTATTTATTTGATCGCATTCCAATTGGAACGAAAGTATGGATTGTGAAATCGAAAAAATCATTT
CAGCAATTGGCAAAAGAAAAAGGAGCCGTTGCATATGAAAAAGCCAACAAAAAGGTTGGCTTTTTCATATGGAATAAGTT
GTCTTGA

Upstream 100 bases:

>100_bases
AAACTTGTTCAACTTGTGTATGAAATGGAGCAATATTTACTCATTAAAAGTCGCTTTAAGGGAAAGGATAATATAAAAGA
ACTTATATAGAAGGTAGGAA

Downstream 100 bases:

>100_bases
CATGTGTACATAACCATGCGTTAATGAGAGTATAGAAAGATAAAATTAGATAAAGGGGTTGCTCATATGTACTTGAATCC
AAAGCTTTCGTATATGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MFMPYLLSFILCLSLSPIWPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMKAKDPYY
IAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSF
QQLAKEKGAVAYEKANKKVGFFIWNKLS

Sequences:

>Translated_188_residues
MFMPYLLSFILCLSLSPIWPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMKAKDPYY
IAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSF
QQLAKEKGAVAYEKANKKVGFFIWNKLS
>Mature_188_residues
MFMPYLLSFILCLSLSPIWPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMKAKDPYY
IAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSF
QQLAKEKGAVAYEKANKKVGFFIWNKLS

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=152, Percent_Identity=33.5526315789474, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787968, Length=151, Percent_Identity=33.7748344370861, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 20945; Mature: 20945

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMPYLLSFILCLSLSPIWPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKT
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCC
NELTPEGTFDIVMKAKDPYYIAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPS
CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHH
SIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSFQQLAKEKGAVAYEKANKKVG
HHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCEEEECCCCEEE
FFIWNKLS
EEEEECCC
>Mature Secondary Structure
MFMPYLLSFILCLSLSPIWPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKT
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCC
NELTPEGTFDIVMKAKDPYYIAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPS
CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHH
SIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSFQQLAKEKGAVAYEKANKKVG
HHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCEEEECCCCEEE
FFIWNKLS
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]