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The map label for this gene is sdaAA [H]

Identifier: 118479336

GI number: 118479336

Start: 3966442

End: 3967338

Strand: Reverse

Name: sdaAA [H]

Synonym: BALH_3753

Alternate gene names: 118479336

Gene position: 3967338-3966442 (Counterclockwise)

Preceding gene: 118479337

Following gene: 118479334

Centisome position: 75.47

GC content: 44.82

Gene sequence:

>897_bases
TTGCAGGGGGGACACACCATGTTTCGGAACGCAGCGGAACTAGTGGCGCAAGCTAAAGAACAAAATGTAAAAATCGCAGA
AATTATGATTCAATGTGAAATGGAAACAAGAAGTATTTCACGTGAAGAAGTAATCGCTGGTATGGAAAAGAACTTAGTCG
TGATGGAGCAAGCAGTAGAACGTGGTATTCGCGGTGTGAAATCACCAACTGGTTTAACTGGCGGAGATGCTGTAAAAGTT
CAGGCGTATATGAAGAGCGGAAAAGGCTTATCTGGAGATACGATTTTGGACGCGGTGAGTAAAGCTGTTGCAACAAATGA
AGTAAACGCAGCGATGGGAATTATTTGTGCAACACCAACAGCAGGGTCTGCTGGAACAGTGCCAGGTGTACTATTTGCAC
TAAGAGAAAAGTTGCAGCCTACACGTGAAGAAATGATTGAATTTTTATTTACAGCAGGAGCTTTCGGTATGGTTGTTGCA
AATAATGCTTGTATTTCTGGTGCAGCAGGAGGATGCCAAGCTGAAGTTGGTTCAGCAAGTGGAATGGCGGCCGCGGCTGC
AGTTGAAATGGCTGGTGGAACACAAGACCAAGCAGCTACAGCGATGGCAATTTCATTAAAGAACATGCTTGGTTTAGTAT
GCGATCCGGTGGCAGGACTTGTAGAAGTACCTTGCGTAAAACGTAATGCAGCAGGAGCTGCAAATGCGATGATTTCAGCT
GATTTAGCATTAGCTGGTGTAACGAGTACCATTCCATGTGATGAAGTAATTGAGGCAATGTTTAGAATCGGACAAACGAT
GCCAGTAGCACTTCGTGAAACAGCAGAAGGTGGACTTGCAGCAACACCGACTGGTCGTCGTCTGCAAGAAGAGATTTTTG
GGAAGACGAATAACTAA

Upstream 100 bases:

>100_bases
AGCACTAATGGTCATCGAAACAGATGAAATATTAGCAGATGAAGTAATTGAAGAAATAAAAGCGCAACAAAATATTTGTC
AAGTAACTATTATGGAATAA

Downstream 100 bases:

>100_bases
AAATATATGTTTATAAGAAATGGAGCTCAAGTAAGATTGAGCTCCATTTCTTATTTTTCTTTTGTTAGTTGTTCTAATGT
TTTCCCGAGGTTATGCGATC

Product: L-serine dehydratase, subunit alpha

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQGGHTMFRNAAELVAQAKEQNVKIAEIMIQCEMETRSISREEVIAGMEKNLVVMEQAVERGIRGVKSPTGLTGGDAVKV
QAYMKSGKGLSGDTILDAVSKAVATNEVNAAMGIICATPTAGSAGTVPGVLFALREKLQPTREEMIEFLFTAGAFGMVVA
NNACISGAAGGCQAEVGSASGMAAAAAVEMAGGTQDQAATAMAISLKNMLGLVCDPVAGLVEVPCVKRNAAGAANAMISA
DLALAGVTSTIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEEIFGKTNN

Sequences:

>Translated_298_residues
MQGGHTMFRNAAELVAQAKEQNVKIAEIMIQCEMETRSISREEVIAGMEKNLVVMEQAVERGIRGVKSPTGLTGGDAVKV
QAYMKSGKGLSGDTILDAVSKAVATNEVNAAMGIICATPTAGSAGTVPGVLFALREKLQPTREEMIEFLFTAGAFGMVVA
NNACISGAAGGCQAEVGSASGMAAAAAVEMAGGTQDQAATAMAISLKNMLGLVCDPVAGLVEVPCVKRNAAGAANAMISA
DLALAGVTSTIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEEIFGKTNN
>Mature_298_residues
MQGGHTMFRNAAELVAQAKEQNVKIAEIMIQCEMETRSISREEVIAGMEKNLVVMEQAVERGIRGVKSPTGLTGGDAVKV
QAYMKSGKGLSGDTILDAVSKAVATNEVNAAMGIICATPTAGSAGTVPGVLFALREKLQPTREEMIEFLFTAGAFGMVVA
NNACISGAAGGCQAEVGSASGMAAAAAVEMAGGTQDQAATAMAISLKNMLGLVCDPVAGLVEVPCVKRNAAGAANAMISA
DLALAGVTSTIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEEIFGKTNN

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-sulfur dependent L-serine dehydratase family [H]

Homologues:

Organism=Escherichia coli, GI48994925, Length=280, Percent_Identity=36.0714285714286, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1788116, Length=280, Percent_Identity=35.3571428571429, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1789161, Length=285, Percent_Identity=35.4385964912281, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR004642 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 30528; Mature: 30528

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGGHTMFRNAAELVAQAKEQNVKIAEIMIQCEMETRSISREEVIAGMEKNLVVMEQAVE
CCCCHHHHHHHHHHHHHHHHCCCEEEHHHEEECHHHHHCCHHHHHHCCCCCHHHHHHHHH
RGIRGVKSPTGLTGGDAVKVQAYMKSGKGLSGDTILDAVSKAVATNEVNAAMGIICATPT
HHHHCCCCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC
AGSAGTVPGVLFALREKLQPTREEMIEFLFTAGAFGMVVANNACISGAAGGCQAEVGSAS
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHEEECCCEECCCCCCCCCCCCCCC
GMAAAAAVEMAGGTQDQAATAMAISLKNMLGLVCDPVAGLVEVPCVKRNAAGAANAMISA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DLALAGVTSTIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEEIFGKTNN
HHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MQGGHTMFRNAAELVAQAKEQNVKIAEIMIQCEMETRSISREEVIAGMEKNLVVMEQAVE
CCCCHHHHHHHHHHHHHHHHCCCEEEHHHEEECHHHHHCCHHHHHHCCCCCHHHHHHHHH
RGIRGVKSPTGLTGGDAVKVQAYMKSGKGLSGDTILDAVSKAVATNEVNAAMGIICATPT
HHHHCCCCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC
AGSAGTVPGVLFALREKLQPTREEMIEFLFTAGAFGMVVANNACISGAAGGCQAEVGSAS
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHEEECCCEECCCCCCCCCCCCCCC
GMAAAAAVEMAGGTQDQAATAMAISLKNMLGLVCDPVAGLVEVPCVKRNAAGAANAMISA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DLALAGVTSTIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEEIFGKTNN
HHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]