| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ypuF [H]
Identifier: 118479263
GI number: 118479263
Start: 3900190
End: 3900708
Strand: Direct
Name: ypuF [H]
Synonym: BALH_3675
Alternate gene names: 118479263
Gene position: 3900190-3900708 (Clockwise)
Preceding gene: 118479256
Following gene: 118479266
Centisome position: 74.19
GC content: 33.33
Gene sequence:
>519_bases ATGTATCCTACCGAATACATACAGTTTTTAATTCATTTTCACGGAGATTATGATTATTTTGAATGTCACGAAATACTGGA AGAATATTGGAAAACAAAACCAAGAGGGAATCGTGATAATTATTTAGTCGGCCTCATTCAAATTGCAGTTTCTTTATACC ATCACAGACGCTCTAACTGGAATGGCGCAGAGAAAATGATGAAAAGCGCCATAACAATTTTAGAAAAAAACAGCGCACAT TTACTTCGTTTAGGAATAAATGAGGCACAGCTTCTATTCTTACTCAAAGATAAATTGCAATCTATCCAGAAAAAAGAAGG TTTTACACCATTATTTTTACCATTATCGGATATAGCATTAGAAAAGCAGTGCATAGAATTATGTGAGAAACAAAACCTTC CTTGGAAAGACGTGAATGCTATTTCTAATGAATATATAGTACATAAACACACATTACGTGATCGAACAGAAGTCATCGCT GAACGAAACGAACAATTACAAAAAAGAAAGCAGAGATAA
Upstream 100 bases:
>100_bases AATATGAACAATAACGACTAGGGAGAAATTCCCTAGTCGTTTATTGTTCATACTTCTATGATAAACTTATATTTATAAAC GTTAGATAGGAGCGAAGAAA
Downstream 100 bases:
>100_bases TAAACTACTTATCTCTGCTTTCACGAATGTATATTTTGTTCAAGCCCTGTACACTTTTTGCAAAAACTTGCTGTTTGCTC ATTTCCACAAATTGTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFX6 [H]
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MYPTEYIQFLIHFHGDYDYFECHEILEEYWKTKPRGNRDNYLVGLIQIAVSLYHHRRSNWNGAEKMMKSAITILEKNSAH LLRLGINEAQLLFLLKDKLQSIQKKEGFTPLFLPLSDIALEKQCIELCEKQNLPWKDVNAISNEYIVHKHTLRDRTEVIA ERNEQLQKRKQR
Sequences:
>Translated_172_residues MYPTEYIQFLIHFHGDYDYFECHEILEEYWKTKPRGNRDNYLVGLIQIAVSLYHHRRSNWNGAEKMMKSAITILEKNSAH LLRLGINEAQLLFLLKDKLQSIQKKEGFTPLFLPLSDIALEKQCIELCEKQNLPWKDVNAISNEYIVHKHTLRDRTEVIA ERNEQLQKRKQR >Mature_172_residues MYPTEYIQFLIHFHGDYDYFECHEILEEYWKTKPRGNRDNYLVGLIQIAVSLYHHRRSNWNGAEKMMKSAITILEKNSAH LLRLGINEAQLLFLLKDKLQSIQKKEGFTPLFLPLSDIALEKQCIELCEKQNLPWKDVNAISNEYIVHKHTLRDRTEVIA ERNEQLQKRKQR
Specific function: Unknown
COG id: COG1547
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005500 - InterPro: IPR023203 [H]
Pfam domain/function: PF03745 DUF309 [H]
EC number: NA
Molecular weight: Translated: 20526; Mature: 20526
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPTEYIQFLIHFHGDYDYFECHEILEEYWKTKPRGNRDNYLVGLIQIAVSLYHHRRSNW CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC NGAEKMMKSAITILEKNSAHLLRLGINEAQLLFLLKDKLQSIQKKEGFTPLFLPLSDIAL CHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH EKQCIELCEKQNLPWKDVNAISNEYIVHKHTLRDRTEVIAERNEQLQKRKQR HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYPTEYIQFLIHFHGDYDYFECHEILEEYWKTKPRGNRDNYLVGLIQIAVSLYHHRRSNW CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC NGAEKMMKSAITILEKNSAHLLRLGINEAQLLFLLKDKLQSIQKKEGFTPLFLPLSDIAL CHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH EKQCIELCEKQNLPWKDVNAISNEYIVHKHTLRDRTEVIAERNEQLQKRKQR HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377 [H]