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The map label for this gene is ylbK [H]

Identifier: 118479146

GI number: 118479146

Start: 3778473

End: 3779273

Strand: Reverse

Name: ylbK [H]

Synonym: BALH_3556

Alternate gene names: 118479146

Gene position: 3779273-3778473 (Counterclockwise)

Preceding gene: 118479148

Following gene: 118479145

Centisome position: 71.89

GC content: 37.2

Gene sequence:

>801_bases
GTGAGAAAAATGAAAGAACCGAAAATTGGCTTAGCTCTTGGATCTGGGGGAGCAAAAGGTTTTGCTCATATTGGTGTTAT
AAAGGTTTTAAGGGAAAATGATATACCGATTCATTTGATTGCAGGAAGTAGTATGGGGGCTTTGGTAGGTACATTTTATG
CAGCTAGTTCAAACGTTGAAAGACTGTATAAACTGGCAAATGTTTTTAAGAGGAAATATTATTTAGATTTTACGGTTCCC
AAAATGGGATTTATTGCTGGAAAACGTGTCAAAGATATGATTAAAATGTTTACATATAATAAAAATTTAGAAGAGTTAGA
TATCCCGACGGCTGTTGTGGCTACTGATATCTTGAAGGGGGAAAAAGTAGTTTTTACAAGTGGTCCAGTTGCAGAGGCGG
TGAGAGCTAGTATTTCTGTGCCTGGAGTGTTTGTGCCAGAGAAAATAGATGGACGATTATTGGTAGATGGGGGAGTAATT
GATCGCATCCCAGTGTCGGTTGTGAAAGAGTTAGGTGCCGATATTGTTATTGCTGTTGATGTATCCCCGATTAAAGTAAA
TGGAGAGGTTACGTCTATTTATGATGTAATTATGCAGAGTATTGAAATTATGCAACATGAGCTTGTGATGAATCGGCAAA
TTGCATCTGATTTAATGATGCGCCCAGCTGTAGAACAATTTAGTTCTCGTGCTTTTACAAACATTGAAGACATTATTCGA
GTTGGAGAGGTAGAAGCGGAAAAGCATGTTGCAAATATTCATTTATTAATTGAGCAGTGGAAGGAGAAACATAATGTTTA
A

Upstream 100 bases:

>100_bases
GTAAATCCCCCTTTGTCCCAAAAAACGTTCATTTCAGTATACGTGGATACGTAGTGAATTTAGACCATAAGTATGAAAAA
GGAATGAAAAAAATTAAAGG

Downstream 100 bases:

>100_bases
GCGTTTTCGGTTTATATATGCAATTTTAATAGGGGTTATATTGGCAATGTTACTTGTTTATGTACGCCTGCCGTATTATA
TAACCAAACCAGGAATGGCT

Product: patatin-like phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRKMKEPKIGLALGSGGAKGFAHIGVIKVLRENDIPIHLIAGSSMGALVGTFYAASSNVERLYKLANVFKRKYYLDFTVP
KMGFIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKVVFTSGPVAEAVRASISVPGVFVPEKIDGRLLVDGGVI
DRIPVSVVKELGADIVIAVDVSPIKVNGEVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIR
VGEVEAEKHVANIHLLIEQWKEKHNV

Sequences:

>Translated_266_residues
MRKMKEPKIGLALGSGGAKGFAHIGVIKVLRENDIPIHLIAGSSMGALVGTFYAASSNVERLYKLANVFKRKYYLDFTVP
KMGFIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKVVFTSGPVAEAVRASISVPGVFVPEKIDGRLLVDGGVI
DRIPVSVVKELGADIVIAVDVSPIKVNGEVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIR
VGEVEAEKHVANIHLLIEQWKEKHNV
>Mature_266_residues
MRKMKEPKIGLALGSGGAKGFAHIGVIKVLRENDIPIHLIAGSSMGALVGTFYAASSNVERLYKLANVFKRKYYLDFTVP
KMGFIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKGEKVVFTSGPVAEAVRASISVPGVFVPEKIDGRLLVDGGVI
DRIPVSVVKELGADIVIAVDVSPIKVNGEVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIR
VGEVEAEKHVANIHLLIEQWKEKHNV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=181, Percent_Identity=34.8066298342541, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI260656037, Length=181, Percent_Identity=34.8066298342541, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI116256487, Length=181, Percent_Identity=34.8066298342541, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI260656043, Length=181, Percent_Identity=34.8066298342541, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI260656039, Length=181, Percent_Identity=34.8066298342541, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI148727335, Length=181, Percent_Identity=36.4640883977901, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI148727290, Length=181, Percent_Identity=36.4640883977901, Blast_Score=112, Evalue=4e-25,
Organism=Escherichia coli, GI226510936, Length=292, Percent_Identity=31.1643835616438, Blast_Score=136, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71997299, Length=255, Percent_Identity=28.2352941176471, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71997289, Length=255, Percent_Identity=28.2352941176471, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI193204778, Length=164, Percent_Identity=26.8292682926829, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323581, Length=273, Percent_Identity=24.5421245421245, Blast_Score=101, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28571388, Length=273, Percent_Identity=29.3040293040293, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281376913, Length=273, Percent_Identity=29.6703296703297, Blast_Score=98, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29302; Mature: 29302

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKMKEPKIGLALGSGGAKGFAHIGVIKVLRENDIPIHLIAGSSMGALVGTFYAASSNVE
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHH
RLYKLANVFKRKYYLDFTVPKMGFIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKG
HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCC
EKVVFTSGPVAEAVRASISVPGVFVPEKIDGRLLVDGGVIDRIPVSVVKELGADIVIAVD
CEEEEECCCHHHHHHHHCCCCCEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEE
VSPIKVNGEVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIR
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VGEVEAEKHVANIHLLIEQWKEKHNV
HCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKMKEPKIGLALGSGGAKGFAHIGVIKVLRENDIPIHLIAGSSMGALVGTFYAASSNVE
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHH
RLYKLANVFKRKYYLDFTVPKMGFIAGKRVKDMIKMFTYNKNLEELDIPTAVVATDILKG
HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCC
EKVVFTSGPVAEAVRASISVPGVFVPEKIDGRLLVDGGVIDRIPVSVVKELGADIVIAVD
CEEEEECCCHHHHHHHHCCCCCEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEE
VSPIKVNGEVTSIYDVIMQSIEIMQHELVMNRQIASDLMMRPAVEQFSSRAFTNIEDIIR
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VGEVEAEKHVANIHLLIEQWKEKHNV
HCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]