| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ymfM [H]
Identifier: 118479003
GI number: 118479003
Start: 3620496
End: 3621416
Strand: Reverse
Name: ymfM [H]
Synonym: BALH_3410
Alternate gene names: 118479003
Gene position: 3621416-3620496 (Counterclockwise)
Preceding gene: 118479004
Following gene: 118479002
Centisome position: 68.89
GC content: 37.79
Gene sequence:
>921_bases GTGTTAGTAGTGACAGAATTAGGACAAAAGCTGAAAGAAGCAAGAGGAACGAAAGGCTTGTCTATTGATCAGCTGCATGA GATTACAAAAATTCAAAAACGCCATTTAGTAGCGATTGAAGAAGGCAATTATGATGTATTGCCAGGAGCTTTTTATGCGC GTGCATTCATTAAACAATACGCAGATGCGGTTGGATTAAATGGAGAGGAACTACTTGTAGAATATCAGAGTACGATACCA CAATCTGAAAAACGTGACGTTCCACAAGTATCAACAGGACAAAAAACGCAAGAAACAATGCAAAAATCTTCATCATGGCC AATTGCAGATCACATGCCGAAAATTTTAGTTGCGCTGTTAGTAATCGCAGTTGGAGTGGTAATTTGGTTTGTTTTTCAAG CGTTAACTGGAAAAGATGATGAGAAAGTTCCGAATACTCAAAGTGAGAAAATTGAAGTTAAAAAAGCGGAAAACTCTCCG TTAGATACGAAGAAAGATGAAGTGAAAGCGGAAGAGCCGAAAAAAGAGGAACCAAAGAAAGAAGAACCGAAGAAAGAGGA ACAACCAGCACAGCCAACTGGACAACAAGAAGTGAAAGTAGTTGGGACAACTGGTAAAGTATCTACTTTGGAAATTCATA ATAATAAAACATTAGAACTGGAAATATCGGGTAAAGGTGCGAGTTATGTAGATGTTAAAGATGATGCGGGTAACGAAGTT TTAAACACTACAATACAAGATGGTCAAACAGAAAAACGAGATTTATCAACAGCAAAAGAAGTGCGACTTAATATTGGAAA TGCAACGAATGTTGAAGTTAAACTGAATGGCCAAGTGGTCGCTTATCCATTGGATCCAGAAAAAGAACTTCACCAAAGAT TGGTGATAAAAAACCAAGGGATAGAGCAACCTGCACAATAA
Upstream 100 bases:
>100_bases TAACGATTATGATGAAGAAATTCAATATAATTTAGTAGATGAAATTGAGCAAGGTACGCAAAATAATTTCTCTATGTTTG ACTTTTAAAGAAATATTGAG
Downstream 100 bases:
>100_bases CAGTCATCGCTTCGATGACTTTTTTCAATGAACAAATGTTTTTGATATGATGGAGGAATAGCTGTGAATTTACCAAATAA AATTACAATATCTAGAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLVVTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADAVGLNGEELLVEYQSTIP QSEKRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIAVGVVIWFVFQALTGKDDEKVPNTQSEKIEVKKAENSP LDTKKDEVKAEEPKKEEPKKEEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEV LNTTIQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGIEQPAQ
Sequences:
>Translated_306_residues MLVVTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADAVGLNGEELLVEYQSTIP QSEKRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIAVGVVIWFVFQALTGKDDEKVPNTQSEKIEVKKAENSP LDTKKDEVKAEEPKKEEPKKEEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEV LNTTIQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGIEQPAQ >Mature_306_residues MLVVTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADAVGLNGEELLVEYQSTIP QSEKRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIAVGVVIWFVFQALTGKDDEKVPNTQSEKIEVKKAENSP LDTKKDEVKAEEPKKEEPKKEEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEV LNTTIQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGIEQPAQ
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33936; Mature: 33936
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQY CEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH ADAVGLNGEELLVEYQSTIPQSEKRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALL HHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH VIAVGVVIWFVFQALTGKDDEKVPNTQSEKIEVKKAENSPLDTKKDEVKAEEPKKEEPKK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCC EEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEV CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCCCHH LNTTIQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQG HHHHHCCCCCHHHHHHHHHHHEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHCCC IEQPAQ CCCCCC >Mature Secondary Structure MLVVTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQY CEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH ADAVGLNGEELLVEYQSTIPQSEKRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALL HHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH VIAVGVVIWFVFQALTGKDDEKVPNTQSEKIEVKKAENSPLDTKKDEVKAEEPKKEEPKK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCC EEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEV CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCCCHH LNTTIQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQG HHHHHCCCCCHHHHHHHHHHHEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHCCC IEQPAQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]