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The map label for this gene is yisV [H]

Identifier: 118478980

GI number: 118478980

Start: 3587003

End: 3588436

Strand: Reverse

Name: yisV [H]

Synonym: BALH_3387

Alternate gene names: 118478980

Gene position: 3588436-3587003 (Counterclockwise)

Preceding gene: 118478981

Following gene: 118478979

Centisome position: 68.26

GC content: 37.73

Gene sequence:

>1434_bases
GTGGAATGGAAACCAAATCGTGCAGATAAGACGCCTGTATATAAACAAATAGCGGATTATATTGAAAGGGGTATTTCTTC
AGGGGAGTTTCCTTCTGACAGTAAGTTACCTTCTGAGCGTATGTTAGCGAAAGAATTACAGGTAAACCGAAGTACAATAG
TAGCTGCATATGAAGAATTAAAATCACTTGGAGTAGTAGAACGGCAAAAAGGAAGCGGGACACGGGTGAATACAGACATA
TGGGGTGTTTCACATAAACGAATGCCAAACTGGGATAGGTACGTTGAGGATGGATCGTTCTTACCTAATGTACCACTCGT
TCAACAAATTAGAATGGAAACACAAAAAGACGACTTAATTAATTTAGCGAGCGGTGAATTGTCACTAGAATTGATTCCGA
GCGATAGATTCCGAACGATTTTGTCGGAGAAAACATTTATGGAAAACCTCGGTTATGACCATCCACTTGGGAATGAAATG
TTGAGAAAAACAATTGCAGCACATGTTCAGCAATATAAACAAATTGAAGCAGATTCGAATTCTATCCTTATTACATCTGG
CGCACAACAGGCGCTTAACCTTATCGTGCAATGCTTATTAAAACCAGGAGACGCGATTGCAATTGAAGATCCGTCGTATT
GTTTTTCATTGCCGATGTTTAAATCTGCTGGCTTAAAAATATTCCATCTACCTGTTGATCAGCATGGCATGAATCCAGAT
GACTTAATTGATTTGCATAAAAAGCATCGTATTCGCATGGTATTTTTAAATCCAGATTATCAAAATCCAACGGGAACTGT
GCTGTCATTAACAAGGCGTAAAAAGATTTTAGAACTGTCTTCTGAATTTGGTATACCGATTGTAGAAGATGATCCGTATA
GTTTAACTTCATTTAATGGAGAAGTGAATCCTACATTAAAATCAATGGATCAAAACGGGAATGTGCTTTATATAAGTTCA
TTATCAAAAATTGTTGCATCAGGATTACGTATTGGCTGGGTAATTGGTCCTACGCGTGTAATAGAACGTTTAGCGGATGC
GAAGCAGCAAGTTGATTTTGGGCATAGTGTATTTACGCAGTGGGTGGCAAATCAATTTTTAGAATCAGACGATTTTCATG
CGCATATTACAATGCTTCGTAGACAATTGAAAGAAAGAAGAGATGTATTAATTAGAAAGCTTGAAGAAATATTAGGAGAC
CAGGTTGAATTTTTTGTTCCAGAGGGTGGAATACATTTATGGTGCAAAGTGCAAGGAACGTTTGATGAGTATCATTTATT
AGGTGAATCTATACGAAATGGTGTAGCGTTTGTCCCGGGTAGTGTTTTAGGTACTAAAAGTGAATATATTCGTTTTACTT
TTGGGAGAGTAAATGCCGAACAAATTCAGCTGGGAATGACGAGGTTTGCGGAAACGTTACATGAGATCTCATAA

Upstream 100 bases:

>100_bases
ACCGTTTTGGATATATCCATTTAAGGATAAGAAAATGTGACTGATTCATACTATGATTACTTGACTAAGGGATAGTTCGT
TTTAAGAGGGGGACAACAGG

Downstream 100 bases:

>100_bases
TAGTGATGCGTAATATTGAAATGAGGGAAAGCAATGAAGTACGTGGCGCTTTTACTGCAAGTAGGTGTGCTATATGTATT
TAGCTTAGTTGGTACGTGGA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MEWKPNRADKTPVYKQIADYIERGISSGEFPSDSKLPSERMLAKELQVNRSTIVAAYEELKSLGVVERQKGSGTRVNTDI
WGVSHKRMPNWDRYVEDGSFLPNVPLVQQIRMETQKDDLINLASGELSLELIPSDRFRTILSEKTFMENLGYDHPLGNEM
LRKTIAAHVQQYKQIEADSNSILITSGAQQALNLIVQCLLKPGDAIAIEDPSYCFSLPMFKSAGLKIFHLPVDQHGMNPD
DLIDLHKKHRIRMVFLNPDYQNPTGTVLSLTRRKKILELSSEFGIPIVEDDPYSLTSFNGEVNPTLKSMDQNGNVLYISS
LSKIVASGLRIGWVIGPTRVIERLADAKQQVDFGHSVFTQWVANQFLESDDFHAHITMLRRQLKERRDVLIRKLEEILGD
QVEFFVPEGGIHLWCKVQGTFDEYHLLGESIRNGVAFVPGSVLGTKSEYIRFTFGRVNAEQIQLGMTRFAETLHEIS

Sequences:

>Translated_477_residues
MEWKPNRADKTPVYKQIADYIERGISSGEFPSDSKLPSERMLAKELQVNRSTIVAAYEELKSLGVVERQKGSGTRVNTDI
WGVSHKRMPNWDRYVEDGSFLPNVPLVQQIRMETQKDDLINLASGELSLELIPSDRFRTILSEKTFMENLGYDHPLGNEM
LRKTIAAHVQQYKQIEADSNSILITSGAQQALNLIVQCLLKPGDAIAIEDPSYCFSLPMFKSAGLKIFHLPVDQHGMNPD
DLIDLHKKHRIRMVFLNPDYQNPTGTVLSLTRRKKILELSSEFGIPIVEDDPYSLTSFNGEVNPTLKSMDQNGNVLYISS
LSKIVASGLRIGWVIGPTRVIERLADAKQQVDFGHSVFTQWVANQFLESDDFHAHITMLRRQLKERRDVLIRKLEEILGD
QVEFFVPEGGIHLWCKVQGTFDEYHLLGESIRNGVAFVPGSVLGTKSEYIRFTFGRVNAEQIQLGMTRFAETLHEIS
>Mature_477_residues
MEWKPNRADKTPVYKQIADYIERGISSGEFPSDSKLPSERMLAKELQVNRSTIVAAYEELKSLGVVERQKGSGTRVNTDI
WGVSHKRMPNWDRYVEDGSFLPNVPLVQQIRMETQKDDLINLASGELSLELIPSDRFRTILSEKTFMENLGYDHPLGNEM
LRKTIAAHVQQYKQIEADSNSILITSGAQQALNLIVQCLLKPGDAIAIEDPSYCFSLPMFKSAGLKIFHLPVDQHGMNPD
DLIDLHKKHRIRMVFLNPDYQNPTGTVLSLTRRKKILELSSEFGIPIVEDDPYSLTSFNGEVNPTLKSMDQNGNVLYISS
LSKIVASGLRIGWVIGPTRVIERLADAKQQVDFGHSVFTQWVANQFLESDDFHAHITMLRRQLKERRDVLIRKLEEILGD
QVEFFVPEGGIHLWCKVQGTFDEYHLLGESIRNGVAFVPGSVLGTKSEYIRFTFGRVNAEQIQLGMTRFAETLHEIS

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=313, Percent_Identity=30.9904153354633, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI33469970, Length=313, Percent_Identity=30.9904153354633, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI56713256, Length=318, Percent_Identity=23.8993710691824, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI56713254, Length=318, Percent_Identity=23.8993710691824, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1790797, Length=440, Percent_Identity=26.3636363636364, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787710, Length=454, Percent_Identity=25.7709251101322, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1788722, Length=276, Percent_Identity=26.0869565217391, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71994476, Length=269, Percent_Identity=24.907063197026, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994472, Length=269, Percent_Identity=24.907063197026, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321236, Length=392, Percent_Identity=23.2142857142857, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21356535, Length=391, Percent_Identity=21.7391304347826, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI18859735, Length=343, Percent_Identity=21.865889212828, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 54090; Mature: 54090

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWKPNRADKTPVYKQIADYIERGISSGEFPSDSKLPSERMLAKELQVNRSTIVAAYEEL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
KSLGVVERQKGSGTRVNTDIWGVSHKRMPNWDRYVEDGSFLPNVPLVQQIRMETQKDDLI
HHCCCEEECCCCCCEECCEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE
NLASGELSLELIPSDRFRTILSEKTFMENLGYDHPLGNEMLRKTIAAHVQQYKQIEADSN
EECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SILITSGAQQALNLIVQCLLKPGDAIAIEDPSYCFSLPMFKSAGLKIFHLPVDQHGMNPD
EEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHCCCEEEEECCHHCCCCHH
DLIDLHKKHRIRMVFLNPDYQNPTGTVLSLTRRKKILELSSEFGIPIVEDDPYSLTSFNG
HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCC
EVNPTLKSMDQNGNVLYISSLSKIVASGLRIGWVIGPTRVIERLADAKQQVDFGHSVFTQ
CCCCHHHHCCCCCCEEEEHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHH
WVANQFLESDDFHAHITMLRRQLKERRDVLIRKLEEILGDQVEFFVPEGGIHLWCKVQGT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECC
FDEYHLLGESIRNGVAFVPGSVLGTKSEYIRFTFGRVNAEQIQLGMTRFAETLHEIS
HHHHHHHHHHHHCCEEECCCCHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEWKPNRADKTPVYKQIADYIERGISSGEFPSDSKLPSERMLAKELQVNRSTIVAAYEEL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
KSLGVVERQKGSGTRVNTDIWGVSHKRMPNWDRYVEDGSFLPNVPLVQQIRMETQKDDLI
HHCCCEEECCCCCCEECCEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE
NLASGELSLELIPSDRFRTILSEKTFMENLGYDHPLGNEMLRKTIAAHVQQYKQIEADSN
EECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SILITSGAQQALNLIVQCLLKPGDAIAIEDPSYCFSLPMFKSAGLKIFHLPVDQHGMNPD
EEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHCCCEEEEECCHHCCCCHH
DLIDLHKKHRIRMVFLNPDYQNPTGTVLSLTRRKKILELSSEFGIPIVEDDPYSLTSFNG
HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCC
EVNPTLKSMDQNGNVLYISSLSKIVASGLRIGWVIGPTRVIERLADAKQQVDFGHSVFTQ
CCCCHHHHCCCCCCEEEEHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHH
WVANQFLESDDFHAHITMLRRQLKERRDVLIRKLEEILGDQVEFFVPEGGIHLWCKVQGT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECC
FDEYHLLGESIRNGVAFVPGSVLGTKSEYIRFTFGRVNAEQIQLGMTRFAETLHEIS
HHHHHHHHHHHHCCEEECCCCHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]