| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yppC [H]
Identifier: 118478976
GI number: 118478976
Start: 3582965
End: 3584164
Strand: Direct
Name: yppC [H]
Synonym: BALH_3383
Alternate gene names: 118478976
Gene position: 3582965-3584164 (Clockwise)
Preceding gene: 118478971
Following gene: 118478978
Centisome position: 68.15
GC content: 33.58
Gene sequence:
>1200_bases ATGAAAAAGGGAGGTAATGGAATGTACCGAAGTAATTCAAATCATACATATAACGGACCTTCCCAAGCCCTGCCTCTCTC CCTATTCGATGTAAAAAATGAATTGAAACAAAAAAGCAAGCTCATGCATTCTGACACGATGTATAAATTAACGAAAGAAG AGCAACTCATCATCAACAACATAAAAATACAAACAGAACAGCTAAATAAAAATAATGTGACAAGAACACGCGCATACTAC CAATTTTACATTCAATATCCAGAAATACATTGGGCACTACTTGGGCATATGGTATCACGTAACGGCGGTTGGAATATGAC TGATTTGAAGGGCGATTTATATACGAAAATTTTATCAGAAAAAGATCAAATCACATTTTTTTCTTTTTTGGAAAGAGGGA ATTGGCTTATTTTCCAAGATGTATATCCTCAATTTCTGCTTTATGAACAAAGTGTAAAAAGAGCACAAAAGCTATTTTAC CTTCTCCCTCACCTAAATGTTTCTACATTTATGGAAACGATGTGGAACGATTTTTGGAAAACAGGTAACAAAAAAACATT AGCCATTGCAACTATTATTAATGAACAAAACTACTTAGAAAAAAGAGTGATTCAAAATATACAATTTAAAAAGACTGTAC TTAATAGTATTGGATTTAAACTCTTTGATTTCTTTCAATTTAATCATATTCTTTTCCCATTCTACGAAAATGATAAGAAA CACAAAGTATTATTATTGGGTGATACAATGAAACATTTCACTTCCTTACACGAACGAATCTTAATTGGAAAAAGGTTGTA TTCATTATTATTTCGAGACACACATGTTTTATCTCAAATAATAAGCTGGGCCCAGCACCATCCGCATACAGGATCAAGGA AAGATTACTGGCCCCATTTATTTTCAAGTGTCAATGAATCTTTTTCCCGTGAGTTTTATAAGCGTCGAATAAAGAAATGC CAGTTGCGTAGTGGTGCTTATCGTATATACAGTCCTGCACTCATCTATGCATGGCGAGATATGAAGCATGAAGAAGTTGA CAATGAAGATTGGTTTACGGACTGGCAAGTTGTAAATTACTTAGTAGATAAGGAGGAAAATATAAATGGACAAATTACAG AAGACTACTGTAAAACACTCGAAAAAATTGAACTTGCCATTCTTGCAAAGAAAAACGTCCTCCTTCGAGAAGAAGAATGA
Upstream 100 bases:
>100_bases CATGATAACTAAATTCTTGTAAAAAACACCGCTCATTTATTTCTTATACTCGTAATAAAATAAATAGAATGATTCATAGC CAGTAATCCTGTTTAATTTT
Downstream 100 bases:
>100_bases TTTTCTAGCATTAGCAGCTACAATCTTACTCTCTTCTATTATCGGAACTTTCCTAGATGCTTTCTTTGTTGCGAAACAAA TGTATTCCTTTCCGGTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKKGGNGMYRSNSNHTYNGPSQALPLSLFDVKNELKQKSKLMHSDTMYKLTKEEQLIINNIKIQTEQLNKNNVTRTRAYY QFYIQYPEIHWALLGHMVSRNGGWNMTDLKGDLYTKILSEKDQITFFSFLERGNWLIFQDVYPQFLLYEQSVKRAQKLFY LLPHLNVSTFMETMWNDFWKTGNKKTLAIATIINEQNYLEKRVIQNIQFKKTVLNSIGFKLFDFFQFNHILFPFYENDKK HKVLLLGDTMKHFTSLHERILIGKRLYSLLFRDTHVLSQIISWAQHHPHTGSRKDYWPHLFSSVNESFSREFYKRRIKKC QLRSGAYRIYSPALIYAWRDMKHEEVDNEDWFTDWQVVNYLVDKEENINGQITEDYCKTLEKIELAILAKKNVLLREEE
Sequences:
>Translated_399_residues MKKGGNGMYRSNSNHTYNGPSQALPLSLFDVKNELKQKSKLMHSDTMYKLTKEEQLIINNIKIQTEQLNKNNVTRTRAYY QFYIQYPEIHWALLGHMVSRNGGWNMTDLKGDLYTKILSEKDQITFFSFLERGNWLIFQDVYPQFLLYEQSVKRAQKLFY LLPHLNVSTFMETMWNDFWKTGNKKTLAIATIINEQNYLEKRVIQNIQFKKTVLNSIGFKLFDFFQFNHILFPFYENDKK HKVLLLGDTMKHFTSLHERILIGKRLYSLLFRDTHVLSQIISWAQHHPHTGSRKDYWPHLFSSVNESFSREFYKRRIKKC QLRSGAYRIYSPALIYAWRDMKHEEVDNEDWFTDWQVVNYLVDKEENINGQITEDYCKTLEKIELAILAKKNVLLREEE >Mature_399_residues MKKGGNGMYRSNSNHTYNGPSQALPLSLFDVKNELKQKSKLMHSDTMYKLTKEEQLIINNIKIQTEQLNKNNVTRTRAYY QFYIQYPEIHWALLGHMVSRNGGWNMTDLKGDLYTKILSEKDQITFFSFLERGNWLIFQDVYPQFLLYEQSVKRAQKLFY LLPHLNVSTFMETMWNDFWKTGNKKTLAIATIINEQNYLEKRVIQNIQFKKTVLNSIGFKLFDFFQFNHILFPFYENDKK HKVLLLGDTMKHFTSLHERILIGKRLYSLLFRDTHVLSQIISWAQHHPHTGSRKDYWPHLFSSVNESFSREFYKRRIKKC QLRSGAYRIYSPALIYAWRDMKHEEVDNEDWFTDWQVVNYLVDKEENINGQITEDYCKTLEKIELAILAKKNVLLREEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019658 [H]
Pfam domain/function: PF10720 DUF2515 [H]
EC number: NA
Molecular weight: Translated: 47770; Mature: 47770
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGGNGMYRSNSNHTYNGPSQALPLSLFDVKNELKQKSKLMHSDTMYKLTKEEQLIINN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEE IKIQTEQLNKNNVTRTRAYYQFYIQYPEIHWALLGHMVSRNGGWNMTDLKGDLYTKILSE EEEEEECCCCCCCHHHEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC KDQITFFSFLERGNWLIFQDVYPQFLLYEQSVKRAQKLFYLLPHLNVSTFMETMWNDFWK CCCCHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TGNKKTLAIATIINEQNYLEKRVIQNIQFKKTVLNSIGFKLFDFFQFNHILFPFYENDKK CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC HKVLLLGDTMKHFTSLHERILIGKRLYSLLFRDTHVLSQIISWAQHHPHTGSRKDYWPHL EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH FSSVNESFSREFYKRRIKKCQLRSGAYRIYSPALIYAWRDMKHEEVDNEDWFTDWQVVNY HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHEEEHHHCCHHCCCCCCCCHHHHHHHH LVDKEENINGQITEDYCKTLEKIELAILAKKNVLLREEE HHCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCEEECCC >Mature Secondary Structure MKKGGNGMYRSNSNHTYNGPSQALPLSLFDVKNELKQKSKLMHSDTMYKLTKEEQLIINN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEE IKIQTEQLNKNNVTRTRAYYQFYIQYPEIHWALLGHMVSRNGGWNMTDLKGDLYTKILSE EEEEEECCCCCCCHHHEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC KDQITFFSFLERGNWLIFQDVYPQFLLYEQSVKRAQKLFYLLPHLNVSTFMETMWNDFWK CCCCHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TGNKKTLAIATIINEQNYLEKRVIQNIQFKKTVLNSIGFKLFDFFQFNHILFPFYENDKK CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC HKVLLLGDTMKHFTSLHERILIGKRLYSLLFRDTHVLSQIISWAQHHPHTGSRKDYWPHL EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH FSSVNESFSREFYKRRIKKCQLRSGAYRIYSPALIYAWRDMKHEEVDNEDWFTDWQVVNY HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHEEEHHHCCHHCCCCCCCCHHHHHHHH LVDKEENINGQITEDYCKTLEKIELAILAKKNVLLREEE HHCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377; 7814321 [H]