| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118478933
Identifier: 118478933
GI number: 118478933
Start: 3538465
End: 3539502
Strand: Direct
Name: 118478933
Synonym: BALH_3337
Alternate gene names: NA
Gene position: 3538465-3539502 (Clockwise)
Preceding gene: 118478931
Following gene: 118478934
Centisome position: 67.31
GC content: 33.82
Gene sequence:
>1038_bases TTGTCTCCCTTGCAAATGACTATTTTCAGAAAAGTTTGCTATAATATAAGAAATAATGAAGGTGGTGGGACTATGGAGAC AACGGAATTCCATGATACAATACAAGCCTTTTCTATTTTTTTATTGAATAAAGGCCGAAAACCTTCAACCATTAAACGTT ACGTTTATGACATTGAAGATTTCGGACATTGGTTAGAAAAAAACAAAAAGCTCCCTTCCAGTAATATATGGGCTACACTT TGTACAAAAGACTACGAAGATTACTTTTCCGATTTAAAAAAGAATCGACATTACTCAGAAAAAACGATGCACCGTGTATT TATTGTATTAAATAGAATGCATCACTTTCTAAACATCCCTAATCCATTAAAGAACATGGAAATTTCTATTCAACCAGATC GCACACTTCGCAATGAAGATTTCATTTCATCTGATGAAGAAAAAAGATTAAAACATATAGTTACTTCATTAGAAGGACTT TCAGAAAAACAGCGTCCTGTACGCCCTTTATTGATGGATCGTAATATCGCTATTTTAAATTTACTAATTGACTACGGATT ATCCTTACAGGAACTTACAGCATTAACTATGCATCACGTCCACTTTGAAACGAACACATTATCTATCCCAGCAACCGCAG GGGTAGAAAGAACAATTTCATTAACCAGCGAAGACAAAAAACAACTATATACCTATTACAAAAGCATCCCTGAACCCGTT CGTCCAAAATACCATAGTAATGATCCATTATTTGTCGCATTCGATTTTAATCGAGGAACTTACAGATGGGTATACGAAAA TGATGCACCAAAAGGATTAACAGAAATCGCTATCCAAAAAATGATTCGCCTTGAAGTATCTAGAGCTAATTTACGCAAAG GAATCTCAGGACAACACTTTCGCAACACCTATATTTTAAATTTAATAAAAAAAGAGACTCCGGAGTCAGAAATTATAAAG CTAGCTGGGTTCAAATCAAAAATTTCACTAAAACGATATTATCAATACGCAGAAAATGGAAAAAACGCCTTATCATAA
Upstream 100 bases:
>100_bases CGATGATTTAACACAATGTTAATTTGATTATTATTTTTCTTTCGCATCGATTGTTCCATACAATCACCTCATTTTATCCA CTCACCAAATATTATTATTC
Downstream 100 bases:
>100_bases GGCGTTTTTTCCATTTTTTCTTCAAACAAACGATTTTACTATGACCATTTAACTAATTTTTGCATCTACTATGATGAGTT TCATTCACATTCTCATTAGA
Product: phage integrase
Products: NA
Alternate protein names: Phage Integrase; DNA Integration/Recombination/Invertion Protein; Recombinase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Domain Protein SAM Domain Protein; Phage Integrase/Recombinase Family Protein; Phage Integrase Domain/SAM Domain-Containing Protein; Site-Specific Recombinase; Integrase/Recombinase Family Protein; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSPLQMTIFRKVCYNIRNNEGGGTMETTEFHDTIQAFSIFLLNKGRKPSTIKRYVYDIEDFGHWLEKNKKLPSSNIWATL CTKDYEDYFSDLKKNRHYSEKTMHRVFIVLNRMHHFLNIPNPLKNMEISIQPDRTLRNEDFISSDEEKRLKHIVTSLEGL SEKQRPVRPLLMDRNIAILNLLIDYGLSLQELTALTMHHVHFETNTLSIPATAGVERTISLTSEDKKQLYTYYKSIPEPV RPKYHSNDPLFVAFDFNRGTYRWVYENDAPKGLTEIAIQKMIRLEVSRANLRKGISGQHFRNTYILNLIKKETPESEIIK LAGFKSKISLKRYYQYAENGKNALS
Sequences:
>Translated_345_residues MSPLQMTIFRKVCYNIRNNEGGGTMETTEFHDTIQAFSIFLLNKGRKPSTIKRYVYDIEDFGHWLEKNKKLPSSNIWATL CTKDYEDYFSDLKKNRHYSEKTMHRVFIVLNRMHHFLNIPNPLKNMEISIQPDRTLRNEDFISSDEEKRLKHIVTSLEGL SEKQRPVRPLLMDRNIAILNLLIDYGLSLQELTALTMHHVHFETNTLSIPATAGVERTISLTSEDKKQLYTYYKSIPEPV RPKYHSNDPLFVAFDFNRGTYRWVYENDAPKGLTEIAIQKMIRLEVSRANLRKGISGQHFRNTYILNLIKKETPESEIIK LAGFKSKISLKRYYQYAENGKNALS >Mature_344_residues SPLQMTIFRKVCYNIRNNEGGGTMETTEFHDTIQAFSIFLLNKGRKPSTIKRYVYDIEDFGHWLEKNKKLPSSNIWATLC TKDYEDYFSDLKKNRHYSEKTMHRVFIVLNRMHHFLNIPNPLKNMEISIQPDRTLRNEDFISSDEEKRLKHIVTSLEGLS EKQRPVRPLLMDRNIAILNLLIDYGLSLQELTALTMHHVHFETNTLSIPATAGVERTISLTSEDKKQLYTYYKSIPEPVR PKYHSNDPLFVAFDFNRGTYRWVYENDAPKGLTEIAIQKMIRLEVSRANLRKGISGQHFRNTYILNLIKKETPESEIIKL AGFKSKISLKRYYQYAENGKNALS
Specific function: Unknown
COG id: COG0582
COG function: function code L; Integrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40390; Mature: 40259
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLQMTIFRKVCYNIRNNEGGGTMETTEFHDTIQAFSIFLLNKGRKPSTIKRYVYDIED CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FGHWLEKNKKLPSSNIWATLCTKDYEDYFSDLKKNRHYSEKTMHRVFIVLNRMHHFLNIP HHHHHHHCCCCCCCCCEEEEHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC NPLKNMEISIQPDRTLRNEDFISSDEEKRLKHIVTSLEGLSEKQRPVRPLLMDRNIAILN CCHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHH LLIDYGLSLQELTALTMHHVHFETNTLSIPATAGVERTISLTSEDKKQLYTYYKSIPEPV HHHHHCCCHHHHHHHHHHHEEEECCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCC RPKYHSNDPLFVAFDFNRGTYRWVYENDAPKGLTEIAIQKMIRLEVSRANLRKGISGQHF CCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH RNTYILNLIKKETPESEIIKLAGFKSKISLKRYYQYAENGKNALS HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SPLQMTIFRKVCYNIRNNEGGGTMETTEFHDTIQAFSIFLLNKGRKPSTIKRYVYDIED CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FGHWLEKNKKLPSSNIWATLCTKDYEDYFSDLKKNRHYSEKTMHRVFIVLNRMHHFLNIP HHHHHHHCCCCCCCCCEEEEHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC NPLKNMEISIQPDRTLRNEDFISSDEEKRLKHIVTSLEGLSEKQRPVRPLLMDRNIAILN CCHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHH LLIDYGLSLQELTALTMHHVHFETNTLSIPATAGVERTISLTSEDKKQLYTYYKSIPEPV HHHHHCCCHHHHHHHHHHHEEEECCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCC RPKYHSNDPLFVAFDFNRGTYRWVYENDAPKGLTEIAIQKMIRLEVSRANLRKGISGQHF CCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH RNTYILNLIKKETPESEIIKLAGFKSKISLKRYYQYAENGKNALS HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA