| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yneR [H]
Identifier: 118478848
GI number: 118478848
Start: 3444396
End: 3444701
Strand: Direct
Name: yneR [H]
Synonym: BALH_3246
Alternate gene names: 118478848
Gene position: 3444396-3444701 (Clockwise)
Preceding gene: 118478847
Following gene: 118478850
Centisome position: 65.52
GC content: 34.31
Gene sequence:
>306_bases TTGGAGGAACTATACATGAATCTTTCCGTAACAAAAGAAGCAGCACAATGGTATAAAAACGAATTAAACTTACAATCAGG TGAAACACTACGCTTTTTCGTACAATACGGTGGTTGCAGTACTGTGCAAAAAGGACTTTCTTTAGGTATTCGTAAAGATG ATCCTGCACACCCTACTGTTCAAATTCAAGAAGAAGATATTAACTTCTTTATTGAAAGCGATGATGAGTGGTTCTTCGAT GGACATAATTTAGTTGTTACATTTAACGATGGTGATGATTTCCCGCAATTTAATTATGAAAAATAA
Upstream 100 bases:
>100_bases AAAATAAGATCGTAACCCACATAACGCAAAAAGAAAACGTGAAGCATATTAATAGCGTCTTTTTGCGTTATTTTTTATAC TAAAGAAAAAGCAACATAAT
Downstream 100 bases:
>100_bases AAAAACGTGGCTTCCGCCACGCTTTTTTATTTTTTCTTGATTTCCTCATATTTCGCATACCACTCTGGATAGAACTTTTT AAATGATACCGGGCGGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MEELYMNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEEDINFFIESDDEWFFD GHNLVVTFNDGDDFPQFNYEK
Sequences:
>Translated_101_residues MEELYMNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEEDINFFIESDDEWFFD GHNLVVTFNDGDDFPQFNYEK >Mature_101_residues MEELYMNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEEDINFFIESDDEWFFD GHNLVVTFNDGDDFPQFNYEK
Specific function: Unknown
COG id: COG4841
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR008326 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 11781; Mature: 11781
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELYMNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTV CCCEEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCEE QIQEEDINFFIESDDEWFFDGHNLVVTFNDGDDFPQFNYEK EEEECCEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MEELYMNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTV CCCEEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCEE QIQEEDINFFIESDDEWFFDGHNLVVTFNDGDDFPQFNYEK EEEECCEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969507; 9384377 [H]