Click here to switch to the map view.

The map label for this gene is nrdD [H]

Identifier: 118478846

GI number: 118478846

Start: 3441624

End: 3443480

Strand: Reverse

Name: nrdD [H]

Synonym: BALH_3244

Alternate gene names: 118478846

Gene position: 3443480-3441624 (Counterclockwise)

Preceding gene: 118478849

Following gene: 118478845

Centisome position: 65.5

GC content: 37.43

Gene sequence:

>1857_bases
ATGTTACAAAAAAATAAACGTGGAGAAGAATTAATGAGAGTGTTTGAGACGATTGTCCACGGCAATGAACAAGATTTAAT
GCAAGAAAATGCAAATGTAGATGGCCGCTCTCCGATGGGCGTAATGGGAACGTTCGCATCTGAGAGTGCGAAATATTATG
CAGTTGAAAATTTATTGTCAAATCAAGTGAAAAAGGCGATCAATCAAAATATATTATATCCGCATGACTTGGATTTTTAT
GCGACTGGAACGACGACTTGTTCGCAGATTCCGTTAGCGCAAATGCTTGCGAACGGTTTTCATACCGGACATGGACATAT
GAGACAACCGCAAGACATTAAAAGTGCATTGGCTCTTTCATCTATTATTTTTCAAGCGAATCAAAATATGCAGCACGGTG
GTCAATCATTTGCACTCTTTGATGTTGACTTAGCTCCATATGTGAGAAAAACAGTAGAGAGACATAAGAAACGATTGCAG
TCATATCCGCTTACGAAAGAACAAATAGAAGAATTTGCGTGGAAAGAAACAGAAAATGATACGTATCAGGCTTGTGAAGC
TTTCATTCATAATTCAAATAGTATGCATAGTAGGGGCGGAGGACAAGTACCGTTTATTTCTATTAATTATGGAACAGATA
CGTCTAAAGAGGGACGATTATTAGTTAGACAGCTTTTAAAAGCGACACAAGCTGGTCTTGGTAAAGGGGAAACACCAATT
TTTCCTATTCAAATTTTTAAAATGAAAAAAGGTGTGAACTTTGAAGAATGTGATCCGAACTATGATTTATTTGAATTAGC
GTTAGAGACAACGGCTGAAAGGTTATTCCCTAACTTTTCATTTTTAGATGCGCCATTTAATGCTGTGCATTATGATGGAC
GACCGGAAAGTGAAGTATGTTACATGGGATGTCGTACTCGTGTTATGTCGAACATACATGGAGAAGAAACAGCGATTGGA
AGAGGGAATTTATCATTTACATCTATTAATTTAGTCAAATTAGCATTAATTAGTGGTTCAAAAGAAGCGTTTTTTGAAGC
GTTAAATTATTATTTAGATTTAGGAATTAAGCAATTATTAGAGCGATTTGAGTATCAATGTACGAAGCGAGCAAGAGATT
TCCGATTTTTATATTCACAAGGTGTATGGCGCGGTGGAGAAAAGTTACAGCCTGAAGATTCTGTAGCATCCATTTTAAAG
CAAGGGACGTTAAGTCTTGGTTTTATCGGCCTTGCGGAGTGTTTAGTAGCTTTAACAGGAAAGCATCATGGAGAAGATGA
AGAATCATGGAAACTCGGGTATGAAATTATTTCCTTTATGAGGGATAGAATGGATAAAGCGACAGAAGAACATGAACTGA
ATTTCTCGGTAATTGCAACTCCAGCAGAAGGATTATCAGGGAAGTTTGTGAAAAAAGATAGAGAAGAATTTGGCGTGATT
AGCGGTATAACAAATCATAATTACTATACGAATTCATTCCATATTCCAGTTTATTATAACATTCAAGCGATAAATAAAAT
TCGTTTAGAAGGCCCGTTCCACGCTCTATGTAACGGGGGACATATTACGTATATTGAACTAGATGGAGCAGCAATGCATA
ACAAAAAGGCATTAAAACAAATTGTGCAAGCGATGGCAGAACATGGCGTTGGATACGGTTCAATTAATCATCCTGTTGAC
CGTTGTAAGTGCTGTAGTTATCACGGGGTTATTGGAAATGAATGTCCGAGCTGCGGAAATGAAGATGAGGCTAATATAGA
AAGAATTCGCCGTATAACAGGTTATCTTGTAGGAGATATGTCGAAGTGGAATAGTGCGAAACGTAGTGAAGAGATGGATC
GGGTGAAACATAAATGA

Upstream 100 bases:

>100_bases
AAAAATTTCACAGGAATGTTACATTTCTCACAGAAACAATAAGACTATATGTAGTAACATTTTAATCAAAAGACAACAAC
ATATTGGTGGAGGGTTATAA

Downstream 100 bases:

>100_bases
AAGTGATGAACATTATTCATGATAGTGTAGTAGATGGAGAAGGGTTGCGGACAGTCGTGTTTTTTGCGGGCTGTCCGCAT
CGTTGTTTCGGTTGCCATAA

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MLQKNKRGEELMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLSNQVKKAINQNILYPHDLDFY
ATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQ
SYPLTKEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLVRQLLKATQAGLGKGETPI
FPIQIFKMKKGVNFEECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRTRVMSNIHGEETAIG
RGNLSFTSINLVKLALISGSKEAFFEALNYYLDLGIKQLLERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILK
QGTLSLGFIGLAECLVALTGKHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
SGITNHNYYTNSFHIPVYYNIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQIVQAMAEHGVGYGSINHPVD
RCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDMSKWNSAKRSEEMDRVKHK

Sequences:

>Translated_618_residues
MLQKNKRGEELMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLSNQVKKAINQNILYPHDLDFY
ATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQ
SYPLTKEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLVRQLLKATQAGLGKGETPI
FPIQIFKMKKGVNFEECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRTRVMSNIHGEETAIG
RGNLSFTSINLVKLALISGSKEAFFEALNYYLDLGIKQLLERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILK
QGTLSLGFIGLAECLVALTGKHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
SGITNHNYYTNSFHIPVYYNIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQIVQAMAEHGVGYGSINHPVD
RCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDMSKWNSAKRSEEMDRVKHK
>Mature_618_residues
MLQKNKRGEELMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLSNQVKKAINQNILYPHDLDFY
ATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQ
SYPLTKEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLVRQLLKATQAGLGKGETPI
FPIQIFKMKKGVNFEECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRTRVMSNIHGEETAIG
RGNLSFTSINLVKLALISGSKEAFFEALNYYLDLGIKQLLERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILK
QGTLSLGFIGLAECLVALTGKHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
SGITNHNYYTNSFHIPVYYNIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQIVQAMAEHGVGYGSINHPVD
RCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDMSKWNSAKRSEEMDRVKHK

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=630, Percent_Identity=33.4920634920635, Blast_Score=318, Evalue=8e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 69684; Mature: 69684

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKNKRGEELMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLS
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH
NQVKKAINQNILYPHDLDFYATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALS
HHHHHHHCCCCCCCCCCCEEECCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQSYPLTKEQIEEFAWKETEND
HHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
TYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLVRQLLKATQAGLGKGETPI
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FPIQIFKMKKGVNFEECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVC
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCHHH
YMGCRTRVMSNIHGEETAIGRGNLSFTSINLVKLALISGSKEAFFEALNYYLDLGIKQLL
HHHHHHHHHHHCCCCCCCCCCCCCEEEEHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILKQGTLSLGFIGLAECLVALTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
KHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCHH
SGITNHNYYTNSFHIPVYYNIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQ
CCCCCCCEEECEEEEEEEEEEEEEEEEEECCCHHHHCCCCEEEEEEECCCHHHHHHHHHH
IVQAMAEHGVGYGSINHPVDRCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDM
HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
SKWNSAKRSEEMDRVKHK
HHHCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQKNKRGEELMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLS
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH
NQVKKAINQNILYPHDLDFYATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALS
HHHHHHHCCCCCCCCCCCEEECCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQSYPLTKEQIEEFAWKETEND
HHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
TYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLVRQLLKATQAGLGKGETPI
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FPIQIFKMKKGVNFEECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVC
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCHHH
YMGCRTRVMSNIHGEETAIGRGNLSFTSINLVKLALISGSKEAFFEALNYYLDLGIKQLL
HHHHHHHHHHHCCCCCCCCCCCCCEEEEHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILKQGTLSLGFIGLAECLVALTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
KHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCHH
SGITNHNYYTNSFHIPVYYNIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQ
CCCCCCCEEECEEEEEEEEEEEEEEEEEECCCHHHHCCCCEEEEEEECCCHHHHHHHHHH
IVQAMAEHGVGYGSINHPVDRCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDM
HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
SKWNSAKRSEEMDRVKHK
HHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]