Click here to switch to the map view.

The map label for this gene is 118478837

Identifier: 118478837

GI number: 118478837

Start: 3429924

End: 3430649

Strand: Direct

Name: 118478837

Synonym: BALH_3234

Alternate gene names: NA

Gene position: 3429924-3430649 (Clockwise)

Preceding gene: 118478834

Following gene: 118478847

Centisome position: 65.24

GC content: 29.34

Gene sequence:

>726_bases
ATGATATTTCAAAATTATTGTACTCCTCCTCTTCCATATTCGCAACAACTTTTTGAAATATTTATATGTCCATATTTCAA
AAATATTGTTTTCACCTATATTTTCCTGTATATTTTTATTGAGGTGATTGTATTGAATGGCTTTGAAAAAGTGAAAGAAA
AGAAAAAACGCGCTATTAAAGAGGCAGCTTTCTTATTATTTTCAGAACGTGGATTTAATGAAGTAAAAATAGAACATATC
GCAAAAGAAGCAAACGTTTCTCAAGTTACAATTTATAATCATTTTGGAAGTAAAGATGCGTTATTTAGAGAACTTATACA
AGAATTTATCATATGTGAATTTCAATATTATAAAGAACTTGCTGAAGAAAAATTACCTTTCCATGACATGATGAAAAAAA
TGATTGTACGAAAAATGAATACTGGCGGGTTATTTCAACCTGATATGTTGCTACAAATGATGCAAAGAGACGAAATTCTC
CGAGAGTTTATTTATAGTTATCAAAATGAAAAAATACTGCCATGGTATTTAGAAATATTAGAACTAGCGCAGCGCAATAA
TGAAATTAACCCTCACCTTACTAAAGAAATGATGTTACTTTACATTCAAATGTTTACAAAATTAGGTGATGATTTTGGGG
CACAGCTTCTTGAAGGAGATCGCGAAAAACATATTCAAGATATTGTCACTATGTTTTTCTATGGTCTTTCTGTTCCACAA
AAATAA

Upstream 100 bases:

>100_bases
TCAAATGTAATATGAAACAAGCCTTTTCCGTTCGAAAATTGTTTTGTGACATTTTGAACTGAAATCATAAATCCACCTCA
TTTTTTGAAATATTTAATGT

Downstream 100 bases:

>100_bases
AAAGACACGAAATTCGTGTCTTTTTTATTTTACAGTGATAACTCTACCTGTTTCACTACTTTCAACCGCTAATTGAATTA
GCTTAATAACTTCTAAACCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MIFQNYCTPPLPYSQQLFEIFICPYFKNIVFTYIFLYIFIEVIVLNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHI
AKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEKLPFHDMMKKMIVRKMNTGGLFQPDMLLQMMQRDEIL
REFIYSYQNEKILPWYLEILELAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKHIQDIVTMFFYGLSVPQ
K

Sequences:

>Translated_241_residues
MIFQNYCTPPLPYSQQLFEIFICPYFKNIVFTYIFLYIFIEVIVLNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHI
AKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEKLPFHDMMKKMIVRKMNTGGLFQPDMLLQMMQRDEIL
REFIYSYQNEKILPWYLEILELAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKHIQDIVTMFFYGLSVPQ
K
>Mature_241_residues
MIFQNYCTPPLPYSQQLFEIFICPYFKNIVFTYIFLYIFIEVIVLNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHI
AKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEKLPFHDMMKKMIVRKMNTGGLFQPDMLLQMMQRDEIL
REFIYSYQNEKILPWYLEILELAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKHIQDIVTMFFYGLSVPQ
K

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28936; Mature: 28936

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA