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The map label for this gene is fdhD [H]

Identifier: 118478815

GI number: 118478815

Start: 3399215

End: 3400012

Strand: Reverse

Name: fdhD [H]

Synonym: BALH_3209

Alternate gene names: 118478815

Gene position: 3400012-3399215 (Counterclockwise)

Preceding gene: 118478816

Following gene: 118478814

Centisome position: 64.67

GC content: 34.59

Gene sequence:

>798_bases
GTGAAACCGATACAGGTAGAAAGAGAAATCTTTCGTTATGAACAAGGGGCGTTTAAACATATAGAGGACAGCATTGTAAC
AGAGTTTCCAGTCACGATTAAAATGAACGGACAGGAGTTTGTTACAATGGTTAGTACTCCAGAATATATAGAAGATATGG
TAATAGGCTTCTTAGCATCTGAAGGAATCATTCGGAAGTATGAAGATATTGATGACATATGGGTACAAGAGAAAGAAGGA
TTTGTACATGTCACGACGGCAAAAGTAAATCCGTATTACGAACAAATGCAAAATAAACGTTACATTACTTCATGCTGTGG
TATGAGTAGACAAGGATTTGTCTTTGCAAATGATGCACTAAGCGCAAAGAAAATGAATGGCGTGCATGTACAAGTTACTG
CAGAAGACTGTTTTCGATTAATGAAAGAAATGCAGCAATCTGCGGAGACATTTCGTCATACAGGGGGCGTTCATAATGCG
TCTTTATGTGATGTAAATGGTATTATTTTAAGTAGAATGGATATCGGAAGGCATAATGCGTTAGATAAAATTTATGGTTA
TTGCTTAAAAAATAATATTTCTATAGGAGATAAAATCATTGTTTTTAGCGGTCGTATTTCTTCGGAAATATTATTGAAAG
TTGCAAAAATTGGTTGTGAAATTATATTGTCAAAATCAGCTCCAACTGAGTTAGCTTTGCAGCTAGCAAAAGAATTAGGT
ATTACTACGATAGGATTTATTCGGAATCAATCCTTAAATGTATATACGCACCCAGAGCGTGTTTTAAATATAAAATAA

Upstream 100 bases:

>100_bases
AAATTAGTGAACCTATTTTCAGATATGAAAGTAGAAGAAGATATTGCAGTTTCGGTATTTGTTTTTGATAAAAATATAAC
GTGAGAGAAGGATACTGATC

Downstream 100 bases:

>100_bases
GTAAAAGCGAGGCAATAAATATGAAATCTGTCACATTAGACAAACTACAACGTCCGTTAAAGGATTTACGTATTTCAGTT
ACTGATCGCTGTAATTTTCG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEG
FVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSAKKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNA
SLCDVNGIILSRMDIGRHNALDKIYGYCLKNNISIGDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAKELG
ITTIGFIRNQSLNVYTHPERVLNIK

Sequences:

>Translated_265_residues
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEG
FVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSAKKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNA
SLCDVNGIILSRMDIGRHNALDKIYGYCLKNNISIGDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAKELG
ITTIGFIRNQSLNVYTHPERVLNIK
>Mature_265_residues
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEG
FVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSAKKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNA
SLCDVNGIILSRMDIGRHNALDKIYGYCLKNNISIGDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAKELG
ITTIGFIRNQSLNVYTHPERVLNIK

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=269, Percent_Identity=28.2527881040892, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29998; Mature: 29998

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLAS
CCCCHHHHHHHHHHCCHHHHHHHHHHEECCEEEEECCCEEEEEECCHHHHHHHHHHHHHC
EGIIRKYEDIDDIWVQEKEGFVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDAL
CCHHHHHCCHHHHHEECCCCEEEEEEEECCHHHHHHCCCHHHHHHCCCCCCCEEEECCCC
SAKKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNASLCDVNGIILSRMDIGRHNA
CHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCHHH
LDKIYGYCLKNNISIGDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAKELG
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCC
ITTIGFIRNQSLNVYTHPERVLNIK
CEEEEEEECCCEEEEECCCEEEECC
>Mature Secondary Structure
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLAS
CCCCHHHHHHHHHHCCHHHHHHHHHHEECCEEEEECCCEEEEEECCHHHHHHHHHHHHHC
EGIIRKYEDIDDIWVQEKEGFVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDAL
CCHHHHHCCHHHHHEECCCCEEEEEEEECCHHHHHHCCCHHHHHHCCCCCCCEEEECCCC
SAKKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNASLCDVNGIILSRMDIGRHNA
CHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCHHH
LDKIYGYCLKNNISIGDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAKELG
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCC
ITTIGFIRNQSLNVYTHPERVLNIK
CEEEEEEECCCEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA