Click here to switch to the map view.

The map label for this gene is 118478750

Identifier: 118478750

GI number: 118478750

Start: 3321416

End: 3322171

Strand: Direct

Name: 118478750

Synonym: BALH_3142

Alternate gene names: NA

Gene position: 3321416-3322171 (Clockwise)

Preceding gene: 118478745

Following gene: 118478752

Centisome position: 63.18

GC content: 41.53

Gene sequence:

>756_bases
ATGAACGAAAAATATATTATTTTATATGGAACTGCTCTTGAACCAAATTTAATTGGCCCCACACTACCACCAATTCCACC
ATTTACATTTCCGACCGGACCTACTGGAATCACAGGTCCTACCGGTGCGACAGGTTTTACTGGAATTGGAATTACTGGTC
CTACTGGGGTTACAGGACCCACTGGAATTGGAATTACCGGTCCTACTGGGGTTACAGGCCCTACCGGAATTGGAATTACT
GGTCCTACTGGGATTACAGGTCCTACCGGAATTGGAATTACTGGCCCTACTGGAGTTACAGGTCCTACCGGAATTGGAAT
TACTGGTCCCACTGGAGCAACCGGTTTAGGGATTCTTCCCGTATTTGGAACAATAACGACTGACGTAGGTATTGGTTTTT
CAGTAGTAGTTAATACAAATATTAATTTCACCCTTCCAGGACCTGTTAGTGGAACTACTCTAAATCCAGTAGACAACTCC
ATTATAATTAATACTACTGGTGTATACTCAGTATCGTTTTCAATCGTATTTGTGATACAAGCTATTTCGTCTAGTATATT
AAATCTTACAATAAACGATTCAATTCAATTCGCAATTGAATCACGAATTGGTGGTGGTCCTGGGGTAAGAGCTACATCCG
CCAGAACTGATCTATTATCTTTAAACCAAGGAGATGTTCTTCGAGTACGAATAAGAGAAGCCACGGGTGACATTATTTAT
TCCAACGCATCCCTTGTTGTCTCAAAAGTCGACTAG

Upstream 100 bases:

>100_bases
CTGCAAAAAAAATTAAATAAGCGCCTCCGCTATTGCGAATGTCATTTACTTTCCCTACTACATTTAATAATTATGACAAG
CAATCATAGGAGGTTACTAC

Downstream 100 bases:

>100_bases
TTCATTTATTAAAATAACGATTTAGGAATGATAACAATATAAAAAGAAGAGGAAAACTTATATTTCAGTCTACCTCTTCT
TTTCTATTAACAATTCACTG

Product: triple helix repeat-containing collagen

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNEKYIILYGTALEPNLIGPTLPPIPPFTFPTGPTGITGPTGATGFTGIGITGPTGVTGPTGIGITGPTGVTGPTGIGIT
GPTGITGPTGIGITGPTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFSVVVNTNINFTLPGPVSGTTLNPVDNS
IIINTTGVYSVSFSIVFVIQAISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIY
SNASLVVSKVD

Sequences:

>Translated_251_residues
MNEKYIILYGTALEPNLIGPTLPPIPPFTFPTGPTGITGPTGATGFTGIGITGPTGVTGPTGIGITGPTGVTGPTGIGIT
GPTGITGPTGIGITGPTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFSVVVNTNINFTLPGPVSGTTLNPVDNS
IIINTTGVYSVSFSIVFVIQAISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIY
SNASLVVSKVD
>Mature_251_residues
MNEKYIILYGTALEPNLIGPTLPPIPPFTFPTGPTGITGPTGATGFTGIGITGPTGVTGPTGIGITGPTGVTGPTGIGIT
GPTGITGPTGIGITGPTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFSVVVNTNINFTLPGPVSGTTLNPVDNS
IIINTTGVYSVSFSIVFVIQAISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIY
SNASLVVSKVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24903; Mature: 24903

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKYIILYGTALEPNLIGPTLPPIPPFTFPTGPTGITGPTGATGFTGIGITGPTGVTGP
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
TGIGITGPTGVTGPTGIGITGPTGITGPTGIGITGPTGVTGPTGIGITGPTGATGLGILP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
VFGTITTDVGIGFSVVVNTNINFTLPGPVSGTTLNPVDNSIIINTTGVYSVSFSIVFVIQ
EHEEEECCCCCCEEEEEECCEEEEECCCCCCCEECCCCCEEEEECCCEEEEHHHHHHHHH
AISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIY
HHHCCEEEEEECCCEEEEEEECCCCCCCCEECCCCCEEEECCCCCEEEEEEEECCCCEEE
SNASLVVSKVD
ECCEEEEEECC
>Mature Secondary Structure
MNEKYIILYGTALEPNLIGPTLPPIPPFTFPTGPTGITGPTGATGFTGIGITGPTGVTGP
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
TGIGITGPTGVTGPTGIGITGPTGITGPTGIGITGPTGVTGPTGIGITGPTGATGLGILP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
VFGTITTDVGIGFSVVVNTNINFTLPGPVSGTTLNPVDNSIIINTTGVYSVSFSIVFVIQ
EHEEEECCCCCCEEEEEECCEEEEECCCCCCCEECCCCCEEEEECCCEEEEHHHHHHHHH
AISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIY
HHHCCEEEEEECCCEEEEEEECCCCCCCCEECCCCCEEEECCCCCEEEEEEEECCCCEEE
SNASLVVSKVD
ECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA