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The map label for this gene is ntdA [H]

Identifier: 118478549

GI number: 118478549

Start: 3103028

End: 3104353

Strand: Reverse

Name: ntdA [H]

Synonym: BALH_2925

Alternate gene names: 118478549

Gene position: 3104353-3103028 (Counterclockwise)

Preceding gene: 118478552

Following gene: 118478548

Centisome position: 59.05

GC content: 29.56

Gene sequence:

>1326_bases
GTGAAAACTCTTACTACAATTTCTGGACATAGTAAAGACAATTTAGCTTTATTAAAGTGCCTACAGGGGGAAACAAAAGA
AAAAGAATTTGAAATTAGTAATATATTACCGAATCACAAGATGAAAGAGAAATTATTTAGGGAAAACAAATTGAAAATAG
ATATTGATATAGAAAAAGATATTTTCAATTATAGCAGAAAAAATATACAGAAAATAGAATTTATGCCAGTTAATCGGTTA
ATTTCTCAAGATGAGGTTGAAAAAATTATAGGGGTTTTAAAAGATGTTTTACCAACAGGTCAATTTACAAGTGGACCATT
TTCAAAAAAACTAGAAGAAGTAATCGGAAGTTATTTAAATAAAAAGTTTGTAATTGCAACAAGTAGTGGTACAGATGCCC
TTATGGTGTCATTATTATCTATTGGTATTCAGCCGGGAGATGAAGTAATTATGCCAGCTAATAGTTTTGCTGCTACTGAA
AATGCTGTGTTAGCGGTCGGAGCAAAACCTATATTTGTAGATATAGATCAGAAGAGTTTTTGTATTGATCCATTTAAAAT
AGAAGAAGCTATCACCCAAAAAACTAAATGTATTTTACCTGTACATTTGTATGGTAAGCAGTGTGAAATGAGAAAAATTC
GTGAAATCGCGGATATTTATCAGTTAAGAGTTATTGAAGATGCATGTCAAGCTATTGGTTCTTCAAATCTTGGAGAATAT
GGAGATATTATTGTTCTTAGTTTTAACCCATATAAGAATTTTGGTGTATGTGGTAAGGCAGGTGCGATAGTTACCGATAA
TGAAACTCTTGCAATACGTTGCAATCAATATAGTTATCATGGATTTGAAATTAATAAAAAAAATAAAAAGGTATTAGACT
TTGGATTCAATTCTAAAATTGATAATTTGCAAGCAGCTATTGGTTTGGAAAGAATTAAGTACTTATCATATAACAATTTA
AAAAGGGCGTATTTAGCTCAACGATATATACGTAATTTAAAAGAATTAGAAGATAGAGAACTAATTAAGCTACCTACAAT
GACAGAAGATAATGTCTGGCACCTTTTTCCGATTAGAGTTGAAAATGGAAGAAGAGACGAGTTGAAAAATAAATTGTACC
AATTGTATAACATTGAAACAGATATTTATTATCCGGTATTATCTCATAAACAAAATACTAAGTGGATAAAGGAAAATGAT
TTGCAAAACAATATGTTCAATACAGAGCAAGTTCATAAAGAAATATTACATTTACCTTTACATCCAAATATGATGTTAGA
AGAGCAAAATTTCGTTCTGGAGGGATTATTCAATGTCAATAAGTAA

Upstream 100 bases:

>100_bases
ATAGAAAAACCCTCCGTAAAAAATATGTTGACATGTAATCGATAACATAAAATATAGTCTACTCATGATTTTCAAAATAA
TTTCTTAGAGGTGATTTAAC

Downstream 100 bases:

>100_bases
TGAAGTTTTACAGTCTTTAAATTTCGAGAGATTACCACAAGTTAAAAAGCCTAAGTATGTAGTATTCTGTGATTTTGATG
AAACTTATTATCCTCATAAC

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKTLTTISGHSKDNLALLKCLQGETKEKEFEISNILPNHKMKEKLFRENKLKIDIDIEKDIFNYSRKNIQKIEFMPVNRL
ISQDEVEKIIGVLKDVLPTGQFTSGPFSKKLEEVIGSYLNKKFVIATSSGTDALMVSLLSIGIQPGDEVIMPANSFAATE
NAVLAVGAKPIFVDIDQKSFCIDPFKIEEAITQKTKCILPVHLYGKQCEMRKIREIADIYQLRVIEDACQAIGSSNLGEY
GDIIVLSFNPYKNFGVCGKAGAIVTDNETLAIRCNQYSYHGFEINKKNKKVLDFGFNSKIDNLQAAIGLERIKYLSYNNL
KRAYLAQRYIRNLKELEDRELIKLPTMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDIYYPVLSHKQNTKWIKEND
LQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK

Sequences:

>Translated_441_residues
MKTLTTISGHSKDNLALLKCLQGETKEKEFEISNILPNHKMKEKLFRENKLKIDIDIEKDIFNYSRKNIQKIEFMPVNRL
ISQDEVEKIIGVLKDVLPTGQFTSGPFSKKLEEVIGSYLNKKFVIATSSGTDALMVSLLSIGIQPGDEVIMPANSFAATE
NAVLAVGAKPIFVDIDQKSFCIDPFKIEEAITQKTKCILPVHLYGKQCEMRKIREIADIYQLRVIEDACQAIGSSNLGEY
GDIIVLSFNPYKNFGVCGKAGAIVTDNETLAIRCNQYSYHGFEINKKNKKVLDFGFNSKIDNLQAAIGLERIKYLSYNNL
KRAYLAQRYIRNLKELEDRELIKLPTMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDIYYPVLSHKQNTKWIKEND
LQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK
>Mature_441_residues
MKTLTTISGHSKDNLALLKCLQGETKEKEFEISNILPNHKMKEKLFRENKLKIDIDIEKDIFNYSRKNIQKIEFMPVNRL
ISQDEVEKIIGVLKDVLPTGQFTSGPFSKKLEEVIGSYLNKKFVIATSSGTDALMVSLLSIGIQPGDEVIMPANSFAATE
NAVLAVGAKPIFVDIDQKSFCIDPFKIEEAITQKTKCILPVHLYGKQCEMRKIREIADIYQLRVIEDACQAIGSSNLGEY
GDIIVLSFNPYKNFGVCGKAGAIVTDNETLAIRCNQYSYHGFEINKKNKKVLDFGFNSKIDNLQAAIGLERIKYLSYNNL
KRAYLAQRYIRNLKELEDRELIKLPTMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDIYYPVLSHKQNTKWIKEND
LQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK

Specific function: Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI2367285, Length=362, Percent_Identity=29.2817679558011, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 50696; Mature: 50696

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLTTISGHSKDNLALLKCLQGETKEKEFEISNILPNHKMKEKLFRENKLKIDIDIEKD
CCCEEECCCCCCCCHHHHHHHCCCCCCCCEEHHHCCCCCHHHHHHHHCCCEEEEEEECHH
IFNYSRKNIQKIEFMPVNRLISQDEVEKIIGVLKDVLPTGQFTSGPFSKKLEEVIGSYLN
HHHHHHCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
KKFVIATSSGTDALMVSLLSIGIQPGDEVIMPANSFAATENAVLAVGAKPIFVDIDQKSF
CEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCEEEEEECCCCE
CIDPFKIEEAITQKTKCILPVHLYGKQCEMRKIREIADIYQLRVIEDACQAIGSSNLGEY
ECCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GDIIVLSFNPYKNFGVCGKAGAIVTDNETLAIRCNQYSYHGFEINKKNKKVLDFGFNSKI
CCEEEEEECCCCCCCCCCCCCEEEECCCEEEEEECCEEECCEEECCCCCEEEEECCCCCH
DNLQAAIGLERIKYLSYNNLKRAYLAQRYIRNLKELEDRELIKLPTMTEDNVWHLFPIRV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEEEE
ENGRRDELKNKLYQLYNIETDIYYPVLSHKQNTKWIKENDLQNNMFNTEQVHKEILHLPL
CCCCHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
HPNMMLEEQNFVLEGLFNVNK
CCCEEEECCCHHHHHHHCCCC
>Mature Secondary Structure
MKTLTTISGHSKDNLALLKCLQGETKEKEFEISNILPNHKMKEKLFRENKLKIDIDIEKD
CCCEEECCCCCCCCHHHHHHHCCCCCCCCEEHHHCCCCCHHHHHHHHCCCEEEEEEECHH
IFNYSRKNIQKIEFMPVNRLISQDEVEKIIGVLKDVLPTGQFTSGPFSKKLEEVIGSYLN
HHHHHHCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
KKFVIATSSGTDALMVSLLSIGIQPGDEVIMPANSFAATENAVLAVGAKPIFVDIDQKSF
CEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCEEEEEECCCCE
CIDPFKIEEAITQKTKCILPVHLYGKQCEMRKIREIADIYQLRVIEDACQAIGSSNLGEY
ECCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GDIIVLSFNPYKNFGVCGKAGAIVTDNETLAIRCNQYSYHGFEINKKNKKVLDFGFNSKI
CCEEEEEECCCCCCCCCCCCCEEEECCCEEEEEECCEEECCEEECCCCCEEEEECCCCCH
DNLQAAIGLERIKYLSYNNLKRAYLAQRYIRNLKELEDRELIKLPTMTEDNVWHLFPIRV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEEEE
ENGRRDELKNKLYQLYNIETDIYYPVLSHKQNTKWIKENDLQNNMFNTEQVHKEILHLPL
CCCCHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
HPNMMLEEQNFVLEGLFNVNK
CCCEEEECCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]