| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is yyaS [H]
Identifier: 118478528
GI number: 118478528
Start: 3077675
End: 3078358
Strand: Reverse
Name: yyaS [H]
Synonym: BALH_2904
Alternate gene names: 118478528
Gene position: 3078358-3077675 (Counterclockwise)
Preceding gene: 118478532
Following gene: 118478527
Centisome position: 58.56
GC content: 30.26
Gene sequence:
>684_bases ATGAAGAGGTTGATTAAAATGAAGTATGTTTTTTATGTATTAGGAATTTTAATATTAACCCTTGGTATTTCTTTCACAAT ACAATCAGATTTTGGCACTTCACCTTTTGATGCACTTTTAGTAGGACTTTCTTTAAATGTGGGGCTTACTGTGGGAAGCT GGGAAATAATAATAGCTTTATTATTAATATGTTGTAATTCGATATTAAAAAGAAAAAGACCAGAGGTACTAGGGGTGTTA ACAGCATTCATAACGGGTATTGGTATTGATGTGTGGCTATTTTTATTACGCAATTTAATTACACCTGAAATATGGTACAG TAAAATGATTTATTTTGGAATCGGATTAGTTATTACAGGATTAGGAACTGCGATATATTTACAAACAAATTTTGCTCCTA TTCCAATTGACCGATTAACTTTAATCATACAAGAATTAACGAGAACGAATATTTTTATCTCACGAACATTTATTTACCTT ATATTCTTGATAATGGCAACGATTTTACATGGACCAATTGGTATTGGAACTATATTAACCGTTTGTTTAGGTGGGCTATT ACTAAATTCCTTTATGCCACTTACTAAGAAAGTAGTAGATCACTTATTAGTAAACCAGAGTACATCACCAAGCTATAAGA AAAATAAAGCAATTGACCACAATGATAACAAAAGTATCTTTTAA
Upstream 100 bases:
>100_bases TCATAATGAACTCCTTATCTTTTATTTTTATTGCAAATGCAACAATTTGAAGTTACATTTAATATAAAATATTTTTATTG TAAATGCAACAAAAATAACG
Downstream 100 bases:
>100_bases GGAATCCTTTTCTTTTTCTTGCAAAAAATCCAATTGTTTCTTAATGTAGTGATGTAGAAGGATGAACAAGAGAGGGTTTA ATGAAGATGATACATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKRLIKMKYVFYVLGILILTLGISFTIQSDFGTSPFDALLVGLSLNVGLTVGSWEIIIALLLICCNSILKRKRPEVLGVL TAFITGIGIDVWLFLLRNLITPEIWYSKMIYFGIGLVITGLGTAIYLQTNFAPIPIDRLTLIIQELTRTNIFISRTFIYL IFLIMATILHGPIGIGTILTVCLGGLLLNSFMPLTKKVVDHLLVNQSTSPSYKKNKAIDHNDNKSIF
Sequences:
>Translated_227_residues MKRLIKMKYVFYVLGILILTLGISFTIQSDFGTSPFDALLVGLSLNVGLTVGSWEIIIALLLICCNSILKRKRPEVLGVL TAFITGIGIDVWLFLLRNLITPEIWYSKMIYFGIGLVITGLGTAIYLQTNFAPIPIDRLTLIIQELTRTNIFISRTFIYL IFLIMATILHGPIGIGTILTVCLGGLLLNSFMPLTKKVVDHLLVNQSTSPSYKKNKAIDHNDNKSIF >Mature_227_residues MKRLIKMKYVFYVLGILILTLGISFTIQSDFGTSPFDALLVGLSLNVGLTVGSWEIIIALLLICCNSILKRKRPEVLGVL TAFITGIGIDVWLFLLRNLITPEIWYSKMIYFGIGLVITGLGTAIYLQTNFAPIPIDRLTLIIQELTRTNIFISRTFIYL IFLIMATILHGPIGIGTILTVCLGGLLLNSFMPLTKKVVDHLLVNQSTSPSYKKNKAIDHNDNKSIF
Specific function: Unknown
COG id: COG2364
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 [H]
Pfam domain/function: PF02588 DUF161 [H]
EC number: NA
Molecular weight: Translated: 25294; Mature: 25294
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLIKMKYVFYVLGILILTLGISFTIQSDFGTSPFDALLVGLSLNVGLTVGSWEIIIAL CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCEEECCHHHHHHH LLICCNSILKRKRPEVLGVLTAFITGIGIDVWLFLLRNLITPEIWYSKMIYFGIGLVITG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LGTAIYLQTNFAPIPIDRLTLIIQELTRTNIFISRTFIYLIFLIMATILHGPIGIGTILT CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VCLGGLLLNSFMPLTKKVVDHLLVNQSTSPSYKKNKAIDHNDNKSIF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MKRLIKMKYVFYVLGILILTLGISFTIQSDFGTSPFDALLVGLSLNVGLTVGSWEIIIAL CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCEEECCHHHHHHH LLICCNSILKRKRPEVLGVLTAFITGIGIDVWLFLLRNLITPEIWYSKMIYFGIGLVITG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LGTAIYLQTNFAPIPIDRLTLIIQELTRTNIFISRTFIYLIFLIMATILHGPIGIGTILT CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VCLGGLLLNSFMPLTKKVVDHLLVNQSTSPSYKKNKAIDHNDNKSIF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]