| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118478412
Identifier: 118478412
GI number: 118478412
Start: 2938641
End: 2939288
Strand: Direct
Name: 118478412
Synonym: BALH_2778
Alternate gene names: NA
Gene position: 2938641-2939288 (Clockwise)
Preceding gene: 118478403
Following gene: 118478415
Centisome position: 55.9
GC content: 35.19
Gene sequence:
>648_bases GTGTTGGCTAAAATGAAGGAGGGACATTCTTTGCGCGATAGTAATTTAGATTTACGTGTTGTTCGTACGAAAACTGCCAT ACGAAATGCATTTGTGGAATTAATTGAAGAAAAAGGTTTTGACGCCATTACTGTGAAAGATATTACAACAAAAGCAAACA TAAATCGCGGTACTTTCTATGCGCACTATCAAGATAAATTTGATTTAATGACGAAATGCCAAGAAGAAATTATGTATGAG TTTTCTAGCATTGCAAAACAGAAATTTCCAGAAGTGATTGCAGATCTTGGATCAAATCCTTCCCCAACAATGCCATTTCT ACTTATCACTTCTATTCTTGAATTTCTAAATGAAAATAGTGATTTTATGAGAGCTGTACTTAGCCCAAAAGGAGATTTAT CTTTCCAAACAAAACTGAAAGACTTTATGTGGAAAACACTATTTGAAGATACGAATGGCGCTCTCATTGATAAAGAGAAC TTACTCGTCCCAAGCCAATACTTAGCTTCTTATATGGCATCTGCCCATATTGGTGTGATTCAGCAATGGTTAAATAATGG ACAAAAAGAAACACCTGAGGAAATTGCTCGTATTTTATCAACAATTGCAGTTCATGGCCCTTTTTATGCGGCTGGGTTAA AGAAATAA
Upstream 100 bases:
>100_bases ACGTGTTGTTTATTTATATTTTGAATTATATGTTCGAGTTGAACCTTATACAATAATCAAAAATCGTGAATGTGTCGGTT ATCATACACATTCTTGAAAT
Downstream 100 bases:
>100_bases GTCAACTACATAATAAAGGATCATCCACTATAATAGCGGATGATCCTTTGTTTCATTACAACATTTCAATATACCCTTCT GTTCCATGTACCCGAATTCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory Protein; AcrR Family Transcriptional Regulator; Transcription Regulator; TetR Family Regulatory Protein Of MDR Cluster; Regulatory Protein TetR; TetR Family HTH Transcriptional Regulator; Acrr-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; AcrR Protein; Regulatory Protein TetR Family; Transcriptional Regulator TetR/AcrR Family Protein
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLAKMKEGHSLRDSNLDLRVVRTKTAIRNAFVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEEIMYE FSSIAKQKFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMRAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALIDKEN LLVPSQYLASYMASAHIGVIQQWLNNGQKETPEEIARILSTIAVHGPFYAAGLKK
Sequences:
>Translated_215_residues MLAKMKEGHSLRDSNLDLRVVRTKTAIRNAFVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEEIMYE FSSIAKQKFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMRAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALIDKEN LLVPSQYLASYMASAHIGVIQQWLNNGQKETPEEIARILSTIAVHGPFYAAGLKK >Mature_215_residues MLAKMKEGHSLRDSNLDLRVVRTKTAIRNAFVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEEIMYE FSSIAKQKFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMRAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALIDKEN LLVPSQYLASYMASAHIGVIQQWLNNGQKETPEEIARILSTIAVHGPFYAAGLKK
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24365; Mature: 24365
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKMKEGHSLRDSNLDLRVVRTKTAIRNAFVELIEEKGFDAITVKDITTKANINRGTFY CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCEEE AHYQDKFDLMTKCQEEIMYEFSSIAKQKFPEVIADLGSNPSPTMPFLLITSILEFLNENS EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH DFMRAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALIDKENLLVPSQYLASYMASAHIGVI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH QQWLNNGQKETPEEIARILSTIAVHGPFYAAGLKK HHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC >Mature Secondary Structure MLAKMKEGHSLRDSNLDLRVVRTKTAIRNAFVELIEEKGFDAITVKDITTKANINRGTFY CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCEEE AHYQDKFDLMTKCQEEIMYEFSSIAKQKFPEVIADLGSNPSPTMPFLLITSILEFLNENS EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH DFMRAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALIDKENLLVPSQYLASYMASAHIGVI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH QQWLNNGQKETPEEIARILSTIAVHGPFYAAGLKK HHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA