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The map label for this gene is ssuC [H]

Identifier: 118478251

GI number: 118478251

Start: 2769195

End: 2770052

Strand: Reverse

Name: ssuC [H]

Synonym: BALH_2612

Alternate gene names: 118478251

Gene position: 2770052-2769195 (Counterclockwise)

Preceding gene: 118478252

Following gene: 118478250

Centisome position: 52.69

GC content: 34.62

Gene sequence:

>858_bases
TTGTATAAATTGGAGAATACAAGAGCGGTTATTAAAAGGGCGAGTATAACGATTGAGAAAAACAATGTAAAGAAAGTACA
GAAGACGAATATCAAATTTTTGATAAGGGCAATTACTATACCGATTATTATATTAATAATTTGGCAATTGGCTGGCGTAT
TCGGTCTAGTTTCTAAAACAGTTTTACCAACGCCGCTAGATATATTTTTAGCTTTTCAAGAACTTATAAAAACAGGAGAG
TTATTCGGTCATTTAAGTATTAGTGTATTCAGAGCTGCGGCTGGTTTCTTTATTGGCGGGAGTTTAGGAATTATTTTAGG
AACAATTGTTGGATTTTCAACGAGAAGTGAGCAATATTTAGATCCGTCAGTACAAATGTTAAGAACTGTGCCTCACTTAG
CTGTTGCACCGCTTTTCGTATTATGGTTCGGTTTTGGGGAAACATCAAAAGTGTTATTAATTGCAGATGGTGCATTTTTT
CCTTTATACGTAAACGCGTTTCTAGGAATAAGAGGTGTAGATTCAAAATTATTTGATGTTGCGAGAGTGTTAGAGTTTAG
TAAAAGAAAATTAATTACAAAATTAATTTTACCTGCCGCACTACCGAACCTATTACTAGGAGCAAGATTATCATTAGGAG
TTGCATGGGTGAGTTTAGTAGTAGCAGAACTTATGGGATCTACAGAAGGTATTGGCTATATGATAATGGATGCAAGGCAA
TTTTCAAATACAGATATCGTATTTGTCGGTATTATCATCTTTGCATTCGTTGGGAAGTTTTCTGATTCACTCGTACGTTT
ACTAGAAGTGAAGTTTTTAAGATGGCGAGATAATTTTAAAGGGGAGACAGGGAATTAA

Upstream 100 bases:

>100_bases
TTTCAATATAAGCTTGGTTCTATAAAGAAAGAAATTAAGACAGATAAAGTTGTAGATAATTCTTTCGTAGAAAAAGCGTT
AAAGGCGAAGTGAAAAGAGG

Downstream 100 bases:

>100_bases
TATATAAATTATTAGGGGTAATTTATATAGAGTGCTTTAATATACGTTTTAAAATAATAAAGGGGTGTGCAAAAAATGGA
ATTATTATGGTTTATTCCAG

Product: alkanesulfonates transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MYKLENTRAVIKRASITIEKNNVKKVQKTNIKFLIRAITIPIIILIIWQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGE
LFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF
PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMGSTEGIGYMIMDARQ
FSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGETGN

Sequences:

>Translated_285_residues
MYKLENTRAVIKRASITIEKNNVKKVQKTNIKFLIRAITIPIIILIIWQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGE
LFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF
PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMGSTEGIGYMIMDARQ
FSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGETGN
>Mature_285_residues
MYKLENTRAVIKRASITIEKNNVKKVQKTNIKFLIRAITIPIIILIIWQLAGVFGLVSKTVLPTPLDIFLAFQELIKTGE
LFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF
PLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMGSTEGIGYMIMDARQ
FSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGETGN

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=251, Percent_Identity=46.2151394422311, Blast_Score=207, Evalue=6e-55,
Organism=Escherichia coli, GI1786564, Length=237, Percent_Identity=34.5991561181435, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31501; Mature: 31501

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLENTRAVIKRASITIEKNNVKKVQKTNIKFLIRAITIPIIILIIWQLAGVFGLVSKT
CCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHC
DPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFFPLYVNAFLGIRGVDSKLFDV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHH
ARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMGSTEGIGYMIMDARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHH
FSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGETGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYKLENTRAVIKRASITIEKNNVKKVQKTNIKFLIRAITIPIIILIIWQLAGVFGLVSKT
CCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPTPLDIFLAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHC
DPSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFFPLYVNAFLGIRGVDSKLFDV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHH
ARVLEFSKRKLITKLILPAALPNLLLGARLSLGVAWVSLVVAELMGSTEGIGYMIMDARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHH
FSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDNFKGETGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]