BacMap

Definition	Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession	NC_008600
Length	5,257,091

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The map label for this gene is ytrB [H]

Identifier: 118478246

GI number: 118478246

Start: 2762275

End: 2763147

Strand: Reverse

Name: ytrB [H]

Synonym: BALH_2607

Alternate gene names: 118478246

Gene position: 2763147-2762275 (Counterclockwise)

Preceding gene: 118478247

Following gene: 118478245

Centisome position: 52.56

GC content: 30.13

Gene sequence:

>873_bases
ATGATTGCACTTGAAACGAAAGAGATAACGAAAAAATATAAAAAGAAAGTAGCTGTAAATGAAGTTACGATTTCATTAGA
AGAGCATAAAATATATGGTTTGCTTGGAAGAAATGGAGCAGGAAAAACGACACTATTAAATTTACTTGCAGGCCAAATTA
CTTCAAGTAGTGGAAGCGTATCAATATTTGGCCAACATGTTTTTGAGAATAGTAAAGCGATGCAAAATATTTGTTTTGTT
AAAGTGAAAGAAGCTGCTTATTTAAATAATAAAGTTAAAGAAATTTTTAATTTATGTAACATGTTTTATAAAAACTGGGA
TCAAAAGTTTGCTGAAGAACTTGCTAGGAAATTTCAGCTTAATTTGAAAGAAAAATACCATAAATTATCACACGGAATGC
AAACTGTTGTCGGTATTATTCAAGGATTAGCAAGTAGATCACCAATTACTATTTTTGATGAACCAACTACAGGTTTAGAC
GCAGCGCATCGTGAGTTGTTTTATAGTTTACTACTAGAAGATTACGGTGAATATCCACGAACAATTATATTATCAACCCA
CTTAGTAGAAGAAGTAACTCATATTGTTGAAGATGTAATCATCATAAAAGAAGGAAGATTGGTTGTTCAATCATCAGTGG
AAGAATTGTTACAACAAGGTCATATTATTTCAGGAAAAAAAGATAAAGTGGATGAGTTTTCAAGCAATAAAAAAGTAATA
AACCGAGAAGTTTATGGAAATAAGGGGATTGCTGTTATATGGAAAGAACTTTCTAATGAAGATTATTACTCTCTTGAAAA
AGAAGGTTTAGCAATTGATAGAATTACATTACAAAAACTATTTATTCATATAACTGGTGGTGAAGTGAAATGA

Upstream 100 bases:

>100_bases
AGTATTTACCGAAAGTGTGGGAAGAAGCAAAAGTGCTAGAAATATCAAAAGATGAATTGATGGATATGATTCAAAAAATT
ACGAAGGAGGGGAAAGAGGG

Downstream 100 bases:

>100_bases
CGATGTTAATGAAGCAGTTGAAGTTACATATAAAATATCAGTATAAAGCCATTCTTACCTTTTGGGCTGTAGCATTACTT
ATAAAAGGGGCAATGACGGC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIALETKEITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSVSIFGQHVFENSKAMQNICFV
KVKEAAYLNNKVKEIFNLCNMFYKNWDQKFAEELARKFQLNLKEKYHKLSHGMQTVVGIIQGLASRSPITIFDEPTTGLD
AAHRELFYSLLLEDYGEYPRTIILSTHLVEEVTHIVEDVIIIKEGRLVVQSSVEELLQQGHIISGKKDKVDEFSSNKKVI
NREVYGNKGIAVIWKELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK

Sequences:

>Translated_290_residues
MIALETKEITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSVSIFGQHVFENSKAMQNICFV
KVKEAAYLNNKVKEIFNLCNMFYKNWDQKFAEELARKFQLNLKEKYHKLSHGMQTVVGIIQGLASRSPITIFDEPTTGLD
AAHRELFYSLLLEDYGEYPRTIILSTHLVEEVTHIVEDVIIIKEGRLVVQSSVEELLQQGHIISGKKDKVDEFSSNKKVI
NREVYGNKGIAVIWKELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK
>Mature_290_residues
MIALETKEITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSVSIFGQHVFENSKAMQNICFV
KVKEAAYLNNKVKEIFNLCNMFYKNWDQKFAEELARKFQLNLKEKYHKLSHGMQTVVGIIQGLASRSPITIFDEPTTGLD
AAHRELFYSLLLEDYGEYPRTIILSTHLVEEVTHIVEDVIIIKEGRLVVQSSVEELLQQGHIISGKKDKVDEFSSNKKVI
NREVYGNKGIAVIWKELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=212, Percent_Identity=31.1320754716981, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI47078218, Length=212, Percent_Identity=31.1320754716981, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI27881501, Length=240, Percent_Identity=28.3333333333333, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI30795238, Length=240, Percent_Identity=28.3333333333333, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI105990541, Length=208, Percent_Identity=30.2884615384615, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI21536376, Length=224, Percent_Identity=30.8035714285714, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI116734710, Length=215, Percent_Identity=28.8372093023256, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI27262624, Length=209, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27262626, Length=209, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=28.3653846153846, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI150417984, Length=219, Percent_Identity=29.2237442922374, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI27477115, Length=215, Percent_Identity=24.6511627906977, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI27436953, Length=219, Percent_Identity=24.6575342465753, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI6005701, Length=210, Percent_Identity=24.7619047619048, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI153792144, Length=211, Percent_Identity=22.2748815165877, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1786319, Length=236, Percent_Identity=27.9661016949153, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI48994943, Length=224, Percent_Identity=24.5535714285714, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1786563, Length=205, Percent_Identity=28.780487804878, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87081782, Length=222, Percent_Identity=26.5765765765766, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI48995001, Length=233, Percent_Identity=27.0386266094421, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=26.8085106382979, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790190, Length=220, Percent_Identity=27.7272727272727, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=23.9819004524887, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788450, Length=292, Percent_Identity=22.2602739726027, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790739, Length=233, Percent_Identity=25.7510729613734, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788210, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1789593, Length=235, Percent_Identity=23.4042553191489, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788225, Length=237, Percent_Identity=27.8481012658228, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=26.2910798122066, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786803, Length=225, Percent_Identity=23.1111111111111, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=211, Percent_Identity=23.696682464455, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787792, Length=252, Percent_Identity=26.984126984127, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787712, Length=215, Percent_Identity=26.5116279069767, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789032, Length=230, Percent_Identity=24.7826086956522, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788897, Length=213, Percent_Identity=24.8826291079812, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786398, Length=220, Percent_Identity=26.3636363636364, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1790467, Length=217, Percent_Identity=24.8847926267281, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1788472, Length=225, Percent_Identity=24.4444444444444, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=217, Percent_Identity=28.110599078341, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71983523, Length=217, Percent_Identity=28.110599078341, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71983516, Length=217, Percent_Identity=28.110599078341, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17565586, Length=224, Percent_Identity=27.2321428571429, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=210, Percent_Identity=27.1428571428571, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24666092, Length=309, Percent_Identity=26.8608414239482, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24643674, Length=222, Percent_Identity=27.9279279279279, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI221512771, Length=228, Percent_Identity=27.1929824561404, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28573573, Length=217, Percent_Identity=27.6497695852535, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28573571, Length=217, Percent_Identity=27.6497695852535, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007328, Length=246, Percent_Identity=24.390243902439, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574150, Length=246, Percent_Identity=24.390243902439, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582014, Length=201, Percent_Identity=28.3582089552239, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24582012, Length=201, Percent_Identity=28.3582089552239, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24648314, Length=231, Percent_Identity=25.1082251082251, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32866; Mature: 32866

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALETKEITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSV
CCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
SIFGQHVFENSKAMQNICFVKVKEAAYLNNKVKEIFNLCNMFYKNWDQKFAEELARKFQL
EEEHHHHHHCHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLKEKYHKLSHGMQTVVGIIQGLASRSPITIFDEPTTGLDAAHRELFYSLLLEDYGEYPR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
TIILSTHLVEEVTHIVEDVIIIKEGRLVVQSSVEELLQQGHIISGKKDKVDEFSSNKKVI
EEEHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHE
NREVYGNKGIAVIWKELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK
EHHHCCCCCCEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure
MIALETKEITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSV
CCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
SIFGQHVFENSKAMQNICFVKVKEAAYLNNKVKEIFNLCNMFYKNWDQKFAEELARKFQL
EEEHHHHHHCHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLKEKYHKLSHGMQTVVGIIQGLASRSPITIFDEPTTGLDAAHRELFYSLLLEDYGEYPR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
TIILSTHLVEEVTHIVEDVIIIKEGRLVVQSSVEELLQQGHIISGKKDKVDEFSSNKKVI
EEEHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHE
NREVYGNKGIAVIWKELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK
EHHHCCCCCCEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]