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The map label for this gene is pepF [H]

Identifier: 118478215

GI number: 118478215

Start: 2733183

End: 2734766

Strand: Reverse

Name: pepF [H]

Synonym: BALH_2573

Alternate gene names: 118478215

Gene position: 2734766-2733183 (Counterclockwise)

Preceding gene: 118478216

Following gene: 118478214

Centisome position: 52.02

GC content: 31.25

Gene sequence:

>1584_bases
ATGCATGAAATTGCTAAATGGGATTTAGGTCGATTGTATTCGAATACAGATATTTTAGTTCCAATATTAGAGTTGAAAGA
ACAATTTTTTGTAACAAAAGATATAGGGATTCTTTCAAATCTTATACAATCTATTGAAAAAGCAGAATACTATTTGTACT
GCCGATCAGCTGAAGAAAGTGTTTCATCTGACATTACTAGATTGACTATGAAAGTAAAGGAACTAAAAAGTGAAGTGCAG
CAAGTCATACAGCAAAGTGAATTGGAAATTACCGATAATACTAGGCTAATAAAAGATGAACTTCATGCGTGGGAAAATAT
GTACATACAATTAAAGGATAGGATAGAAATAGAGCACAATAATAAGCAATTATCATTTGGACAAGCAAATCATGTTGCAA
TGAATAGTGATAATGAAAAGGAAAGACTAGAAGTATTCGAGTCATTAATATGTGCTTTACATAAGGAGAAAGAAATTTTT
GCTACTGTATTAAATCAAATAGGAAGATTGCGTAATACAAAGGGCAATGAATTAGAAGATAGAGAGATTTTAGCAAGGTC
CCTTCATGCGAATGGTATTTCAGAAACTGTATTATTACAAATATGGAATGCGACAGAAGAAAACCTAGATAAATTAGTAA
GTGCTTTAAACGTGTATAAAAAAGGAAAAACTTCGATAACATGGCATGAACTTATGACAGTAAAGGAAAATAATGAGGTT
AGTATTCTTTTTTCAGTAGCAGTACAAAACATATACGGTGCATTTAAAAATATAGATGAAGAATTAGCAGAATTTGCACG
TAATGCGATAGAAAGTGGTTGGGTAGATGCAGAACCGAGAGAGAATAAACCCCCAGGTGGATTTTGTGCTCCTTTTTTCA
GTGAAAAAGAATCTCGAATCTCTATGCGTTATGACGGAAGTATCGATAGTGTAAGAATACTTGCCCACGAACTAGGACAT
GCTTGGCATTTTTATAATATGAGTTTTGAGCAATCCTCTTCTTTTTTAGATGATTATTTGCCAATGAGTACAGCTGAATC
AGCGTCTATTTTCTTTGAAACGTTGCTTATAAATTATCTAATTCAAACAACAGATAGTATAGATATAAAAAAGTCATTGC
TTAGCTGGAAAATAAGAAACTGTTTTAATTATGTAATGGCAATTCGAGCATCGTTCGAATTTGAGAAGAACTTTTATGAA
AAATGTAAAGAAAGTCCTATAAGTGCTGATGAAATCGAGAAAATATCTATAGTAGCGCAAGAAAAAGCATATGGGAATGC
ATTATCAGAATATCAGCCATTTGTTTGGATGAAATATGTCCAGTTTTATATAGCAGATGTTCCTTTTTATAATTATCCAT
ACACATTTGGATATTTAGTTAGTTTTAGTTTATTAGAAATAGCTAAAGAAAATAAAAGTACGTTTCATTCGAAGTATAAA
GAGTTTTTAAGAGAAACTGGAAAGGCCCCAGTGGAAGAGCTTATAAAAAAACATTTTGAAATAGATATAACAAGCTATGC
ATTCTGGGATAAAGCTTTTAAACAAATTTCTAAAGATATTGATGCATATTTGAGGCTTATATAA

Upstream 100 bases:

>100_bases
AATCTAAATATTTAAAGATATTAAAATTTTTTCGTTTCATATATAATTGTGAAGGGGGAATATTTGTAACTATTTGTAAA
AAAGGGAGGCGGCTATAAAA

Downstream 100 bases:

>100_bases
GGGGAGAGTATAGTGGATCACCAACTTATAAAGGGAATACCTTTTTCAACTTTAGAATATGCAAAAGCTATAAGTTTATT
AAAAGGTTGGCTACATGAAA

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSELEITDNTRLIKDELHAWENMYIQLKDRIEIEHNNKQLSFGQANHVAMNSDNEKERLEVFESLICALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
SILFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPISADEIEKISIVAQEKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDITSYAFWDKAFKQISKDIDAYLRLI

Sequences:

>Translated_527_residues
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSELEITDNTRLIKDELHAWENMYIQLKDRIEIEHNNKQLSFGQANHVAMNSDNEKERLEVFESLICALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
SILFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPISADEIEKISIVAQEKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDITSYAFWDKAFKQISKDIDAYLRLI
>Mature_527_residues
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSELEITDNTRLIKDELHAWENMYIQLKDRIEIEHNNKQLSFGQANHVAMNSDNEKERLEVFESLICALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
SILFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPISADEIEKISIVAQEKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDITSYAFWDKAFKQISKDIDAYLRLI

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 61312; Mature: 61312

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEES
CCCCHHCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHH
VSSDITRLTMKVKELKSEVQQVIQQSELEITDNTRLIKDELHAWENMYIQLKDRIEIEHN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHEEEEEEEEEEEEC
NKQLSFGQANHVAMNSDNEKERLEVFESLICALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCE
SILFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYEKCKESPISADEIEKISIVAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEH
EKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
HHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELIKKHFEIDITSYAFWDKAFKQISKDIDAYLRLI
HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEES
CCCCHHCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHH
VSSDITRLTMKVKELKSEVQQVIQQSELEITDNTRLIKDELHAWENMYIQLKDRIEIEHN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHEEEEEEEEEEEEC
NKQLSFGQANHVAMNSDNEKERLEVFESLICALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCE
SILFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYEKCKESPISADEIEKISIVAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEH
EKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
HHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELIKKHFEIDITSYAFWDKAFKQISKDIDAYLRLI
HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]