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The map label for this gene is oppC [C]

Identifier: 118477696

GI number: 118477696

Start: 2177288

End: 2178337

Strand: Reverse

Name: oppC [C]

Synonym: BALH_2029

Alternate gene names: 118477696

Gene position: 2178337-2177288 (Counterclockwise)

Preceding gene: 118477697

Following gene: 118477689

Centisome position: 41.44

GC content: 33.52

Gene sequence:

>1050_bases
GTGGCAAAAGCAATTGAAAGGAGCAGCTTTATGAAATCTATTTGGAAATCAAAACGCTTTTTAATCGGCTTTACTTATTT
ATTCATACTTGTTTCAGCTAGTTTTATTTATAGTTGGTTCTTTAAAGATACCATCCCAAAAGCTCCCCAGTTACTTTACA
ATGACAATAACGAATTACTTGGAAAGGCTCCCTTTCCACCATCATTAATACCGCCTTTTGGATCGGATCGTTTTGGAGAG
TCTGTTTTCTTACAAATTATAGAAGGAGCAAAGTTCACCATTTTATTAGCCGTGGTAATTAGCTTCTTTCGCATATTATT
CGGAACATGTATAGGAATACTCTTAAGTTTATACGCTTCAAAATTCAAGAGATTTTTCCAGGCATGCTCAGAAGTTTTTT
ACTATATTCCTACTTTATTTATCGCATTTATACTCATCACACCTGTTAATATTGTAATCGTATCAAATGCTGATAGATTA
GATCCAAATATTTCATTTGCGTTTTATCAAGTACTCGTACTTATATTCGTCGCACTGCCTACACTTTCTTTATATATATC
CTCAGAGGTTGATGAATTTATGAAACAAGATTACATTTTAAGTTCCCAATTGCTAGGAGCTAGCCGTTTTCATATTATCA
AAAAACACTTACGAGTCTTGTTACTTGATCGCTTATTTGTGTTATTTATGGAACATATTGTCCAATCGCTCATACTCGTT
ATCCATTTAGCGTTGCTTGATATTATAATTGGCGGGATCCAAATGCGGGAACTCTATGATGGAGCGCTCAAACCTGTTTC
TCTATCTAATGATTGGGCTGGCCTTATTGGATTAAATCGTTATGAAATGAATCTTTCGTGGTGGATTATTTTTTATTCTC
TCGCTTCATTCTTTATTACGATTCTATTTATTAAGCTTATGACAATCGGGATTCAAGATGCACTGAAAGCAAGAGATTCG
CAAACTGTAGCAATTCAATCTGTTCCAGATCAAAAGAAATTTGTTAAACATAAAGATTCTTTTTCTTTTGCAAATAAAGT
AAACCTTTAA

Upstream 100 bases:

>100_bases
AAAAGGCGTTTATTTCACCACCAGCTGCATTTATCATACTTGTGATGATTATTTTACCGTTTTACGCCATTTTTCAAATC
ATCTCTTTCATGATGAATAA

Downstream 100 bases:

>100_bases
TCATCTCTCATAAATCAAGTATGAATTGGCATTGATATTAGTAGAATATAAAAAGATGATCCCTATTGAATACAGAGATC
ATCTTTTTTATACCGTCTAA

Product: oligopeptide transport system, permease

Products: NA

Alternate protein names: Oligopeptide Transport System Permease Protein OppC; Oligopeptide Transport System Permease Protein AppC; Oligopeptide Transport System Permease; Peptide ABC Transporter Permease; Oligopeptide Permease OppC; ABC Transporter; Dipeptide Transport System Permease; ABC-Type Transport System Permease Protein; Dipeptide ABC Transporter Permease Protein DppC; Oligopeptide Transport System Permease Protein-Like Protein; Peptide ABC Transporter Permease Protein; ABC-Type Transport System Permease Component; ABC Transporter Membrane Spanning Protein; Dipeptide Transport System Permease Protein DppC; Dipeptide ABC Transporter Membrane Spanning Protein

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELLGKAPFPPSLIPPFGSDRFGE
SVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYASKFKRFFQACSEVFYYIPTLFIAFILITPVNIVIVSNADRL
DPNISFAFYQVLVLIFVALPTLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQSLILV
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFITILFIKLMTIGIQDALKARDS
QTVAIQSVPDQKKFVKHKDSFSFANKVNL

Sequences:

>Translated_349_residues
MAKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELLGKAPFPPSLIPPFGSDRFGE
SVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYASKFKRFFQACSEVFYYIPTLFIAFILITPVNIVIVSNADRL
DPNISFAFYQVLVLIFVALPTLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQSLILV
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFITILFIKLMTIGIQDALKARDS
QTVAIQSVPDQKKFVKHKDSFSFANKVNL
>Mature_348_residues
AKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELLGKAPFPPSLIPPFGSDRFGES
VFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYASKFKRFFQACSEVFYYIPTLFIAFILITPVNIVIVSNADRLD
PNISFAFYQVLVLIFVALPTLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQSLILVI
HLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFITILFIKLMTIGIQDALKARDSQ
TVAIQSVPDQKKFVKHKDSFSFANKVNL

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yddopqrs. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787760, Length=278, Percent_Identity=22.3021582733813, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787054, Length=252, Percent_Identity=21.4285714285714, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39934; Mature: 39803

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELL
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC
GKAPFPPSLIPPFGSDRFGESVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFKRFFQACSEVFYYIPTLFIAFILITPVNIVIVSNADRLDPNISFAFYQVLVLIFVALP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQSLILV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFIT
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEECHHHHHHHHHHHHHHHH
ILFIKLMTIGIQDALKARDSQTVAIQSVPDQKKFVKHKDSFSFANKVNL
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure 
AKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC
GKAPFPPSLIPPFGSDRFGESVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFKRFFQACSEVFYYIPTLFIAFILITPVNIVIVSNADRLDPNISFAFYQVLVLIFVALP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQSLILV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFIT
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEECHHHHHHHHHHHHHHHH
ILFIKLMTIGIQDALKARDSQTVAIQSVPDQKKFVKHKDSFSFANKVNL
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA