| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118477554
Identifier: 118477554
GI number: 118477554
Start: 2027278
End: 2027958
Strand: Direct
Name: 118477554
Synonym: BALH_1879
Alternate gene names: NA
Gene position: 2027278-2027958 (Clockwise)
Preceding gene: 118477553
Following gene: 118477556
Centisome position: 38.56
GC content: 36.86
Gene sequence:
>681_bases ATGAGTTTAGATTGTAGAGTTAGAGAATCTATACAAGAAGAAGCGAAGGGGATTGTTGCCCCGCCGGAGTTGAAAGAAAA AGTAATCGTTCAAATAAAAATGAATCAAGGGGGGCGTAAGAGGAAGAAACGCCTTATCGCAGGAGTACTTGCAGCGGCTT TTTTAATCCCGACGACTGGTTTTGCGTATCAATCTATTATGGCAGATGGTATATACGGATCTTTTGAGAATTTAAAAAAG CATGCTGGAACGATGACATTAGAGGCGTACATGCGTTTTAGTGCAAAGTTATCAGAAGCGAAAGATGAAATGGGTACGAA AGAATATGAAGTGTTTACAAAAGAACTAAAGAAATTAACGAATGCAAAGCTTGCGTACGGAGATTCGAACGGTAATATTG ATTATGATGCATTATCACCAGAAAAAAGAGAAGAAATGAAAAAGGTAAGTATGGGCCTTCAACCATACTTTGATAAATTA AATGGTCATAAATCAAGTAAAGAAGTATTAACGCAAGAAGAGTTTGATCGCTATATGGAAGCTTTAATGACACATGAAAT CGTACGAGTGAAGACAAAATCAACTGGTGCAATAAAAGTAGAAGAAATACCTGAGGCGTACAAAGAAAGGTTTATTAAAG CGGAGCAGTTTATGGAGTATGTAGACGAAAAGGTAAGATAA
Upstream 100 bases:
>100_bases CAATTGGTACTGTGAAATCTAGAATTCACGCAGCATTAAAAAAACTACGTCAAAAAGAGCAAATAGAAGAAATCTTTTTA GGAGAGGTAGGGAATGTGAA
Downstream 100 bases:
>100_bases GTTAGAAAGCTCATAGCTTTTGCTTTGAGCTTTCTTTATTGAAACAAAAAAAGAGTGCTCAATTATATTTTTTCATATTT ACAGTATCTTTTTGTATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Ecf-Type Sigma Factor Negative Effector
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTGFAYQSIMADGIYGSFENLKK HAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLTNAKLAYGDSNGNIDYDALSPEKREEMKKVSMGLQPYFDKL NGHKSSKEVLTQEEFDRYMEALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR
Sequences:
>Translated_226_residues MSLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTGFAYQSIMADGIYGSFENLKK HAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLTNAKLAYGDSNGNIDYDALSPEKREEMKKVSMGLQPYFDKL NGHKSSKEVLTQEEFDRYMEALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR >Mature_225_residues SLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTGFAYQSIMADGIYGSFENLKKH AGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLTNAKLAYGDSNGNIDYDALSPEKREEMKKVSMGLQPYFDKLN GHKSSKEVLTQEEFDRYMEALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25802; Mature: 25671
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTG CCCCHHHHHHHHHHHCCCCCCHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC FAYQSIMADGIYGSFENLKKHAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLT HHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NAKLAYGDSNGNIDYDALSPEKREEMKKVSMGLQPYFDKLNGHKSSKEVLTQEEFDRYME CCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH ALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR HHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTG CCCHHHHHHHHHHHCCCCCCHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC FAYQSIMADGIYGSFENLKKHAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLT HHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NAKLAYGDSNGNIDYDALSPEKREEMKKVSMGLQPYFDKLNGHKSSKEVLTQEEFDRYME CCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH ALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR HHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA