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The map label for this gene is 118477234

Identifier: 118477234

GI number: 118477234

Start: 1684461

End: 1685027

Strand: Direct

Name: 118477234

Synonym: BALH_1540

Alternate gene names: NA

Gene position: 1684461-1685027 (Clockwise)

Preceding gene: 118477232

Following gene: 118477235

Centisome position: 32.04

GC content: 32.63

Gene sequence:

>567_bases
ATGAAATCAAATGAGAAAAATTATATAAAAAGATTACAGCGGCAAAAAGAAGATGCATTAGAATTTGTTGTCGATACATA
CTTACCACTCATAAAAGGAATCACGCATAAAGTTCTTCTTCCTGTTCAAAATGATGGATTAATAGAGGAATGTGTAAACG
ATATATTTCTTTCCATATGGAATAACGCAAATAAATTTCATGGAGAGCCAAGTGATTTTAAAAAATGGGTTGCGGCAATT
GCGAAGTTTAAAGCAATTGATTATTACCGGAAAGCGACTAAAAAAGTAGAAATTATTTCAGATGAGTTTCATATCAGTAC
GGAAAAGTCAGCGGAAGATGAATTAATTGTTATGGAAGATAGAGAAGAATTATTGAAGCTTATTAATCAATTAGAACCGT
TAGATCAAAAGGTGTTCATTATGAAATATCTTCTCGGTATGAAGACAGAAGAAATAGGAGACAAGTTAGGATTAACCCGG
GCAGCAATCGATAATCGTGTGTACCGTGGGAAAAAGAAACTACAACAAAATGCTACGAATATTAGTTTTGGAGGTAGTGT
AATATGA

Upstream 100 bases:

>100_bases
CCATTACATACAAAAAATAATAAAAAGATGAGAGAAAATATTTTTTTAGACGTTATATAGGGTGTAAAAGCTTTTACAAA
AAAATAAGGGGAATCGCTAC

Downstream 100 bases:

>100_bases
AAGACATTTATGAACTATTAAATGATATTGATATAGATGAAAAAGAACTTAAGGAAATTGAGACTTCTGAAATTGAAAAA
GAAAAAGTGAAGCGTAACTT

Product: RNA polymerase factor sigma-70

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-70 Factor; RNA Polymerase; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-70factor

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKSNEKNYIKRLQRQKEDALEFVVDTYLPLIKGITHKVLLPVQNDGLIEECVNDIFLSIWNNANKFHGEPSDFKKWVAAI
AKFKAIDYYRKATKKVEIISDEFHISTEKSAEDELIVMEDREELLKLINQLEPLDQKVFIMKYLLGMKTEEIGDKLGLTR
AAIDNRVYRGKKKLQQNATNISFGGSVI

Sequences:

>Translated_188_residues
MKSNEKNYIKRLQRQKEDALEFVVDTYLPLIKGITHKVLLPVQNDGLIEECVNDIFLSIWNNANKFHGEPSDFKKWVAAI
AKFKAIDYYRKATKKVEIISDEFHISTEKSAEDELIVMEDREELLKLINQLEPLDQKVFIMKYLLGMKTEEIGDKLGLTR
AAIDNRVYRGKKKLQQNATNISFGGSVI
>Mature_188_residues
MKSNEKNYIKRLQRQKEDALEFVVDTYLPLIKGITHKVLLPVQNDGLIEECVNDIFLSIWNNANKFHGEPSDFKKWVAAI
AKFKAIDYYRKATKKVEIISDEFHISTEKSAEDELIVMEDREELLKLINQLEPLDQKVFIMKYLLGMKTEEIGDKLGLTR
AAIDNRVYRGKKKLQQNATNISFGGSVI

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21721; Mature: 21721

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNEKNYIKRLQRQKEDALEFVVDTYLPLIKGITHKVLLPVQNDGLIEECVNDIFLSIW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHHH
NNANKFHGEPSDFKKWVAAIAKFKAIDYYRKATKKVEIISDEFHISTEKSAEDELIVMED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEECC
REELLKLINQLEPLDQKVFIMKYLLGMKTEEIGDKLGLTRAAIDNRVYRGKKKLQQNATN
HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISFGGSVI
CCCCCCCC
>Mature Secondary Structure
MKSNEKNYIKRLQRQKEDALEFVVDTYLPLIKGITHKVLLPVQNDGLIEECVNDIFLSIW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHHH
NNANKFHGEPSDFKKWVAAIAKFKAIDYYRKATKKVEIISDEFHISTEKSAEDELIVMED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEECC
REELLKLINQLEPLDQKVFIMKYLLGMKTEEIGDKLGLTRAAIDNRVYRGKKKLQQNATN
HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISFGGSVI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA