Click here to switch to the map view.

The map label for this gene is fliN [C]

Identifier: 118477198

GI number: 118477198

Start: 1649774

End: 1650133

Strand: Direct

Name: fliN [C]

Synonym: BALH_1503

Alternate gene names: 118477198

Gene position: 1649774-1650133 (Clockwise)

Preceding gene: 118477197

Following gene: 118477199

Centisome position: 31.38

GC content: 38.06

Gene sequence:

>360_bases
ATGAAGCATGAAGTATCTCCTGTGTCATTAATGGGATTAGAAGATTTTGCAGGAAAGCGAAATGAAGCAAGTAAAGCACA
TATTGATACTGTTTCAGATATTTCGATTGAACTTGGTGTAAAGCTTGGAAAGGCATCTATTACGCTCGGTGATGTGAAAG
AGTTAAAAGTGGGCGATGTTCTAGAAGTAGAGAAAAACTTAGGACATAAAGTAGATGTGTATTTAAGTAATATGAAAGTC
GGCATTGGGGAAGCGATCGTAATGGACGAGAAGTTCGGTATTATCATTTCTGAAATTGAAGCTGACAAGAAGCAAGCTGC
GCTTATGAAAGCGCAAAGTCAAATGCAGGATAAAGAGTAG

Upstream 100 bases:

>100_bases
GGTTATGTAGATGGAAAGCATAAATTTAATTGTTTTATTGGAAAAGATGGAACGCGTAAGGCGCTCTTATTTAAAAGTTT
TGTAGAGTAGGAGGATCCAT

Downstream 100 bases:

>100_bases
AGGAGGAGTCATATGTCGTATATGACGACCTTATTTCAAGTCGTTTTACTGTTTGGTGCGCTCGGCTACGGTGCATATTA
TATGACGAAAAAGACGCGCA

Product: flagellar motor switch protein

Products: NA

Alternate protein names: Flagellar Motor Switch Protein FliN; Flagellar Motor Switch Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKELKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Sequences:

>Translated_119_residues
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKELKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
>Mature_119_residues
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKELKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12939; Mature: 12939

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKELKVGDV
CCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEECEEECCEEEEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKELKVGDV
CCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEECEEECCEEEEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA