| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is dinG [H]
Identifier: 118477094
GI number: 118477094
Start: 1533336
End: 1536140
Strand: Direct
Name: dinG [H]
Synonym: BALH_1395
Alternate gene names: 118477094
Gene position: 1533336-1536140 (Clockwise)
Preceding gene: 118477093
Following gene: 118477095
Centisome position: 29.17
GC content: 35.61
Gene sequence:
>2805_bases ATGAGTAAGCGTTATGTCGTTGTGGATTTAGAGACGACAGGGAACTCCTGGAAGGATGGGAAAGATAAAATTACCCAAAT TGCAGCTGTTGTAGTGGAAGATGGAGAGATATTAGAGATTTTTTCATCTTTTATTAATCCGAAGAGAGAGATTCCGCCAT TTATTACAGAGTTAACAGGGATTGATGAGAGTATGGTTAAGCAAGCCCCGTTATTTGAAGATGTAGCCCCGATGGTTGTT GAGCTATTACAAGGTGCAGCTTTCGTTGCCCATAACGTTCACTTTGATTGGAATTTTTTAACGGAAGAATTAAGGCAGGC TGGATATACAGAAATACATTGCCCAAAAGTTGATACAGTTGAGTTGGCGCAAATTCTTTTGCCAACGGCTGATAGTTATA AATTACGTGATTTAGCTAAACAACATGAACTAGAGCACGATCAACCGCATCGTGCGGATAGTGATGCTCTTGCTACAGCG GAATTATTTTTACAATTTTTAAATGAAATTGAAAAGTTACCACTTGTCACCTTGCAATCGCTTTATGAATTGAGCGATGT TTTTCAAAGTGATATTGCGGATGTACTTTCTGAAAATATTTTAAAGAAAATGATGCATGGTAAAAAAGCGGCAGAGGAGT ATGAAGTGTATCGAAATATTGCGCTTCGAAAACGAAATTATTCTTTAAATCTCAGTGAAACATGTTCCTCTAAATTTGAT GCTTTTTTGCATAAGACAATCGATAAACTTGCATTGAATATGCCAAAGTTTGAAAAAAGAGAAAGCCAACAAATTATGAT GAAGGAAATATATACAGCACTAAGAGATTCTAGGTTTTCCTTAATCGAAGCAGGAACAGGTACAGGGAAGACTCTTGCGT ATTTGCTTCCAAGTATTTATTTTGCAAAGAAAAAAGAAGAACCTGTCATCATAAGTACCCAAACCGTACAACTGCAACAA CAAATACTAGAAAAAGAAATTCCATTATTACAGAAAATAATGCCATTTTCATTTGAAGTAGCTCTTTTGAAAGGAAGAAA GCATTATCTTTGCCTACATAAATTTGAATATGCTTTGCAAGAGGAAGAGAAAAATTATGATATGGCGCTCACAAAGGCAA AAATTTTAGTATGGTTATTGCAAACGGAAACTGGTGATCGGGATGAATTAAATATCCCTGAGGGCGGAAAGTTACTTTGG AACCGTATTTGTAGTGATGTACATAGTCCGGGCGGGATGCAAAGCAACTGGTTTAGTCGTTGTTTTTATCAACGGGCAAA GAATAAAGCATTATTTGCAGATATCGTTATTACAAATCATGCGTTATTATTTCAAGATTTTTCAAGTGAAGAACCATTGT TTGCTTCATGTGAACATATTATTTTTGATGAAGCTCATCATATTGAGGAAGCGGCAAGTAGAACATTAGGTGAACAGTTC TCCTGTATGTATTTCCAGTTAGTCTTATCTCGTCTTGGTACGCTAGAAACAGATGATGTACTTTCTAAAGTATATAAAAT GATGAAAAAATCAGAACAAGCCTCTCGTTCGACTTTCCGGATGGTGAGTCATAGTTTGAAGGAATTGAAATTTGATGCGG ATGAGCTATTCCAAATGTTACGTGCGTTCATCTTTAAACAAACAAAGCAGGAACAAGGGATAAGCAATATGCCACTCATT TATCGATATAACACAGAAGTAGAGAAAGGTAAGTTATGGGATAGCATTACCGAGTTAACAAATCGTTTTGTATATGATAT AAGAAAATTATTGACTATACTTCAGAAGCAAGTTGATATATTGCAAAGTAAAATAGAATGGGAAATGCATGTTGTTACTG GTGAATTTATGCATTTAATTGAGTTGTTGAAAAAGATGGCACAAGCTTTACAATTACTCATTTTAGAAAAAAATTCATAT GTGACATGGATGGAGACTGAAACGAAGGGAACCATTCATTCAACTGTTTTATATGGGCAACCTGTTCATATTGCTGAAAG GTTTGCTGATGAATTTTTAACAGAGAAAAAGAGTGTTATTTTCACATCAGCAACGCTGACAGTAAACGATTCATTTGCCT ATATAAAAGAGGAACTAGGTTTACATGATTTTGCTCCTAATACATTACAGGTTCCGTCACCATTCCGTTTTGAAGAACAG ATGAAATTAATGGTTTCAACGGATGTGCCTTTTATTAAGAAAGCAAGTAATGAAGAATATATTGAATCTGTGTCAGCACA TATTGCAAAAATAGCGAAAGCTACAAAAGGTAGAATGCTCGTTTTATTCACCTCGTATGAAATGTTGAAAGAAGCGTATA CGAATTTAAAAAATGACGAGGAGTTAGAAGGGTATTTATTATTAACGCAAAGTGTGAATAATAAGAGCCGAAGTCGTCTT ATTCGTAAGTTTCAAGAGTTCGACAAATCAATTTTGTTAGGAACAAGTAGTTTTTGGGAAGGAATCGATATACCTGGAGA TGCACTTAGTTGTCTTGTTATTGTCCGGCTTCCCTTTACGCCTCCTTATCAACCGATGATAGAAGCAAAAGGAGAGTGGT TAAAAAATCAAGGAGAGGACGTATTTGCTAAGTTAGCACTTCCACAAGCAATACTGCGTTTCAAACAAGGATTTGGTCGT CTCATTAGAACAAGTACAGATACCGGAACAGTATTTGTATTAGACCGTCGTTTGACAAGCTCTTCTTATGGAAAATATTT CTTACAATCAATTCCAACTGTCCCGCTCTATGAAGGTCCTTTAGAAGAATTGTTAGAACAAGTAAAGGAACGACCAACTG AATAA
Upstream 100 bases:
>100_bases AGCTTTTTTGTGCATCTTTTCATTAAGATGAGATAAAACGTGGTATAGTAACATTATATAATTTTCTGTTTGATAGGTAA GAAATTGAGGTGTTACATAT
Downstream 100 bases:
>100_bases AATTGGAAGAAAAATACGCCTGAAGTACATTTAATCTTCAGGCGTAAAAAATGTGGGTAGGAGGAATTTTATTTTTCTTA CTTCTTGTATACAAAATGTC
Product: bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 934; Mature: 933
Protein sequence:
>934_residues MSKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTGIDESMVKQAPLFEDVAPMVV ELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTVELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATA ELFLQFLNEIEKLPLVTLQSLYELSDVFQSDIADVLSENILKKMMHGKKAAEEYEVYRNIALRKRNYSLNLSETCSSKFD AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIYFAKKKEEPVIISTQTVQLQQ QILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQEEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLW NRICSDVHSPGGMQSNWFSRCFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQMLRAFIFKQTKQEQGISNMPLI YRYNTEVEKGKLWDSITELTNRFVYDIRKLLTILQKQVDILQSKIEWEMHVVTGEFMHLIELLKKMAQALQLLILEKNSY VTWMETETKGTIHSTVLYGQPVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ MKLMVSTDVPFIKKASNEEYIESVSAHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDEELEGYLLLTQSVNNKSRSRL IRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFTPPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGR LIRTSTDTGTVFVLDRRLTSSSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE
Sequences:
>Translated_934_residues MSKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTGIDESMVKQAPLFEDVAPMVV ELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTVELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATA ELFLQFLNEIEKLPLVTLQSLYELSDVFQSDIADVLSENILKKMMHGKKAAEEYEVYRNIALRKRNYSLNLSETCSSKFD AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIYFAKKKEEPVIISTQTVQLQQ QILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQEEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLW NRICSDVHSPGGMQSNWFSRCFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQMLRAFIFKQTKQEQGISNMPLI YRYNTEVEKGKLWDSITELTNRFVYDIRKLLTILQKQVDILQSKIEWEMHVVTGEFMHLIELLKKMAQALQLLILEKNSY VTWMETETKGTIHSTVLYGQPVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ MKLMVSTDVPFIKKASNEEYIESVSAHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDEELEGYLLLTQSVNNKSRSRL IRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFTPPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGR LIRTSTDTGTVFVLDRRLTSSSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE >Mature_933_residues SKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTGIDESMVKQAPLFEDVAPMVVE LLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTVELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATAE LFLQFLNEIEKLPLVTLQSLYELSDVFQSDIADVLSENILKKMMHGKKAAEEYEVYRNIALRKRNYSLNLSETCSSKFDA FLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIYFAKKKEEPVIISTQTVQLQQQ ILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQEEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLWN RICSDVHSPGGMQSNWFSRCFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQFS CMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQMLRAFIFKQTKQEQGISNMPLIY RYNTEVEKGKLWDSITELTNRFVYDIRKLLTILQKQVDILQSKIEWEMHVVTGEFMHLIELLKKMAQALQLLILEKNSYV TWMETETKGTIHSTVLYGQPVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQM KLMVSTDVPFIKKASNEEYIESVSAHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDEELEGYLLLTQSVNNKSRSRLI RKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFTPPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGRL IRTSTDTGTVFVLDRRLTSSSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=677, Percent_Identity=30.2806499261448, Blast_Score=263, Evalue=4e-71, Organism=Escherichia coli, GI1787018, Length=729, Percent_Identity=26.3374485596708, Blast_Score=182, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR006054 - InterPro: IPR006310 - InterPro: IPR006055 - InterPro: IPR013520 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR006935 - InterPro: IPR012337 [H]
Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 107483; Mature: 107352
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTG CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHC IDESMVKQAPLFEDVAPMVVELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTV CCHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCHH ELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATAELFLQFLNEIEKLPLVTLQS HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH LYELSDVFQSDIADVLSENILKKMMHGKKAAEEYEVYRNIALRKRNYSLNLSETCSSKFD HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIY HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHHHH FAKKKEEPVIISTQTVQLQQQILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQ HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEECCCCCEEHHHHHHHHHH EEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLWNRICSDVHSPGGMQSNWFSR HHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH CFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF HHHHHHCCCEEEEEHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RAFIFKQTKQEQGISNMPLIYRYNTEVEKGKLWDSITELTNRFVYDIRKLLTILQKQVDI HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSKIEWEMHVVTGEFMHLIELLKKMAQALQLLILEKNSYVTWMETETKGTIHSTVLYGQ HHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEHEEEECC PVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ CHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCEECCCCCCHHHH MKLMVSTDVPFIKKASNEEYIESVSAHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDE HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCC ELEGYLLLTQSVNNKSRSRLIRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFT CCCCEEEEEECCCCHHHHHHHHHHHHHCHHEEECCHHHCCCCCCCCHHHHEEEEEECCCC PPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGRLIRTSTDTGTVFVLDRRLTS CCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC SSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTG CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHC IDESMVKQAPLFEDVAPMVVELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTV CCHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCHH ELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATAELFLQFLNEIEKLPLVTLQS HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH LYELSDVFQSDIADVLSENILKKMMHGKKAAEEYEVYRNIALRKRNYSLNLSETCSSKFD HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIY HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHHHH FAKKKEEPVIISTQTVQLQQQILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQ HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEECCCCCEEHHHHHHHHHH EEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLWNRICSDVHSPGGMQSNWFSR HHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH CFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF HHHHHHCCCEEEEEHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RAFIFKQTKQEQGISNMPLIYRYNTEVEKGKLWDSITELTNRFVYDIRKLLTILQKQVDI HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSKIEWEMHVVTGEFMHLIELLKKMAQALQLLILEKNSYVTWMETETKGTIHSTVLYGQ HHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEHEEEECC PVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ CHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCEECCCCCCHHHH MKLMVSTDVPFIKKASNEEYIESVSAHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDE HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCC ELEGYLLLTQSVNNKSRSRLIRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFT CCCCEEEEEECCCCHHHHHHHHHHHHHCHHEEECCHHHCCCCCCCCHHHHEEEEEECCCC PPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGRLIRTSTDTGTVFVLDRRLTS CCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC SSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]