Click here to switch to the map view.

The map label for this gene is ypjA [H]

Identifier: 118477078

GI number: 118477078

Start: 1519763

End: 1520353

Strand: Direct

Name: ypjA [H]

Synonym: BALH_1379

Alternate gene names: 118477078

Gene position: 1519763-1520353 (Clockwise)

Preceding gene: 118477077

Following gene: 118477079

Centisome position: 28.91

GC content: 32.83

Gene sequence:

>591_bases
TTGGTTTATTTGTATGCAATGTTAAGGCAACGCTCCGTATTGTTATTTTTATTAGTTGTTAACATATTAGGTACAATTTA
CGGATTTATATGGTATGGAAATCAATTAAAAGAAACTTCTCCTATATTTTGGCCGTTTGTACCAGATAGCCCTATGGCGA
GTCTCTTTTTTGTCTTTGTTTTAATTGCTTTTTTAATCAAGAAAAACTGGGGATTAATAGAGGCGCTAGCGATTGTTACT
TTAATAAAATATGGAATATGGGCTGTTGTTGTAAATGGGGTTATGATCTATGTAAAAGGTCCTATTGGTTTTATCGGGTA
TATGTTAATGGTTTCGCATTTTGCGATGGCAGTACAAGCAGTGCTATATGCACCGTTTTACCGTATAAAAAAATGGCATT
TTGCGGTAGCAGCTATATGGACATTACATAATGATGCAATTGATTATTTATTTTGGCAAATGCCGAGATATGGAATTATG
CATTTGTTTGTAGGAGAAATTGGTTATTTTACGTTTTGGCTAAGTATTACAGTGCTATGTATTACATACTATTATTGCTT
ACGTGAGAACCGAAAACAATTTTCTTTATGA

Upstream 100 bases:

>100_bases
ACTACAAAATTTGTAGTCAGCTTTTTATTTTGATGAAAGAAAGTTTACTATATAATAGAGTAGAGTTGGAGGAAAGAATG
AAAGGTGTTGGACATACAGT

Downstream 100 bases:

>100_bases
TAGTTAGAATATGTAGGGGGAGAAAATGAAGAAAAATAAGAGTGGTACAAAAATATTGGATCGATTGATTACGATAGTTG
TTTCATATAGCATAGCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MVYLYAMLRQRSVLLFLLVVNILGTIYGFIWYGNQLKETSPIFWPFVPDSPMASLFFVFVLIAFLIKKNWGLIEALAIVT
LIKYGIWAVVVNGVMIYVKGPIGFIGYMLMVSHFAMAVQAVLYAPFYRIKKWHFAVAAIWTLHNDAIDYLFWQMPRYGIM
HLFVGEIGYFTFWLSITVLCITYYYCLRENRKQFSL

Sequences:

>Translated_196_residues
MVYLYAMLRQRSVLLFLLVVNILGTIYGFIWYGNQLKETSPIFWPFVPDSPMASLFFVFVLIAFLIKKNWGLIEALAIVT
LIKYGIWAVVVNGVMIYVKGPIGFIGYMLMVSHFAMAVQAVLYAPFYRIKKWHFAVAAIWTLHNDAIDYLFWQMPRYGIM
HLFVGEIGYFTFWLSITVLCITYYYCLRENRKQFSL
>Mature_196_residues
MVYLYAMLRQRSVLLFLLVVNILGTIYGFIWYGNQLKETSPIFWPFVPDSPMASLFFVFVLIAFLIKKNWGLIEALAIVT
LIKYGIWAVVVNGVMIYVKGPIGFIGYMLMVSHFAMAVQAVLYAPFYRIKKWHFAVAAIWTLHNDAIDYLFWQMPRYGIM
HLFVGEIGYFTFWLSITVLCITYYYCLRENRKQFSL

Specific function: Unknown

COG id: COG4347

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009845 [H]

Pfam domain/function: PF07187 DUF1405 [H]

EC number: NA

Molecular weight: Translated: 22969; Mature: 22969

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYLYAMLRQRSVLLFLLVVNILGTIYGFIWYGNQLKETSPIFWPFVPDSPMASLFFVFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
LIAFLIKKNWGLIEALAIVTLIKYGIWAVVVNGVMIYVKGPIGFIGYMLMVSHFAMAVQA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHH
VLYAPFYRIKKWHFAVAAIWTLHNDAIDYLFWQMPRYGIMHLFVGEIGYFTFWLSITVLC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITYYYCLRENRKQFSL
HHHHHHHHCCHHHCCC
>Mature Secondary Structure
MVYLYAMLRQRSVLLFLLVVNILGTIYGFIWYGNQLKETSPIFWPFVPDSPMASLFFVFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
LIAFLIKKNWGLIEALAIVTLIKYGIWAVVVNGVMIYVKGPIGFIGYMLMVSHFAMAVQA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHH
VLYAPFYRIKKWHFAVAAIWTLHNDAIDYLFWQMPRYGIMHLFVGEIGYFTFWLSITVLC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITYYYCLRENRKQFSL
HHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]