| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ypiF [H]
Identifier: 118477074
GI number: 118477074
Start: 1517037
End: 1517510
Strand: Direct
Name: ypiF [H]
Synonym: BALH_1375
Alternate gene names: 118477074
Gene position: 1517037-1517510 (Clockwise)
Preceding gene: 118477073
Following gene: 118477075
Centisome position: 28.86
GC content: 34.81
Gene sequence:
>474_bases GTGGGGGAGGGAAGACATTTGAAATGGATTGTAAAAGATGTGGAACAGTTTGAGCAAGCAAGAGAATATGTAGATACAGG TGTTATACCACTTTTATCAATTTCGGCAGCGAAAGAAATGAAAACGGTAGTGGAACAAGGTGAATTTATTGAATTGTTGA GTATGGAGTTGGAAAGAGAGTATAAAGGAAGAGTCCTTTTACTACCTGCATTTACGTATTTAGTAGAAAGTCAAAAAAAT GAAAAAGGTCGTTTGCAAGAATGGACAAATCATTTACAAAAGCAAGGTTTTAAGCATATTGCTTATGTTACAAGTGATTT TTCATGGAAAGAAGATATGCAAGAATTACAGGGGGATTTATTTTGGTTTCCTTCGTTAGCGTTAGAACAATTTAGTGATC AAGCGAAAAGAGAAGTGATTCATGCACATATAAAAAATGTAATGGTGATGCTAGAAGAAAAATGGGGAAGGTGA
Upstream 100 bases:
>100_bases ACTTTTTCAAGAAAAACTACCTTAATATAGGTAGTTTTTCTTTTTTTACCTCTTTTAGTATGGTTTAATATATATAAAGT GAAAGTTCTGTCATTTATAG
Downstream 100 bases:
>100_bases TAATAAACAGAAAGTTCTTATTATTATGAGTAGTATGATATTGACCTGTGCATGAGCGTATTATATCATGATAGTGTCCT AGTTTTTATTTTTTATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGEGRHLKWIVKDVEQFEQAREYVDTGVIPLLSISAAKEMKTVVEQGEFIELLSMELEREYKGRVLLLPAFTYLVESQKN EKGRLQEWTNHLQKQGFKHIAYVTSDFSWKEDMQELQGDLFWFPSLALEQFSDQAKREVIHAHIKNVMVMLEEKWGR
Sequences:
>Translated_157_residues MGEGRHLKWIVKDVEQFEQAREYVDTGVIPLLSISAAKEMKTVVEQGEFIELLSMELEREYKGRVLLLPAFTYLVESQKN EKGRLQEWTNHLQKQGFKHIAYVTSDFSWKEDMQELQGDLFWFPSLALEQFSDQAKREVIHAHIKNVMVMLEEKWGR >Mature_156_residues GEGRHLKWIVKDVEQFEQAREYVDTGVIPLLSISAAKEMKTVVEQGEFIELLSMELEREYKGRVLLLPAFTYLVESQKNE KGRLQEWTNHLQKQGFKHIAYVTSDFSWKEDMQELQGDLFWFPSLALEQFSDQAKREVIHAHIKNVMVMLEEKWGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019615 [H]
Pfam domain/function: PF10673 DUF2487 [H]
EC number: NA
Molecular weight: Translated: 18517; Mature: 18386
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGRHLKWIVKDVEQFEQAREYVDTGVIPLLSISAAKEMKTVVEQGEFIELLSMELERE CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YKGRVLLLPAFTYLVESQKNEKGRLQEWTNHLQKQGFKHIAYVTSDFSWKEDMQELQGDL HCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCH FWFPSLALEQFSDQAKREVIHAHIKNVMVMLEEKWGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GEGRHLKWIVKDVEQFEQAREYVDTGVIPLLSISAAKEMKTVVEQGEFIELLSMELERE CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YKGRVLLLPAFTYLVESQKNEKGRLQEWTNHLQKQGFKHIAYVTSDFSWKEDMQELQGDL HCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCH FWFPSLALEQFSDQAKREVIHAHIKNVMVMLEEKWGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377; 7592464 [H]