| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yunF [H]
Identifier: 118477015
GI number: 118477015
Start: 1459622
End: 1460533
Strand: Direct
Name: yunF [H]
Synonym: BALH_1314
Alternate gene names: 118477015
Gene position: 1459622-1460533 (Clockwise)
Preceding gene: 118477011
Following gene: 118477020
Centisome position: 27.76
GC content: 35.31
Gene sequence:
>912_bases TTGGTCAAAGTGTTCAGAAAGTGGGTAGAATGGATAGAAAGTGAAGTGAAAAAGGGAGGAATATATTTGCTTTTCATTGG AGTAACAGGGTGGGGAGATCATGATTCTTTATATATAGACCCCTATGAAAATAGAAATAAATTACGAACATATAGTGAGT ATTTTCCTATAGTAGAAGTGGACAGTTCATTTTATGCGATGCAACCTGAACGAAATTATACAAAATGGGCAATGGAAACA CCGAAAGATTTTTCTTTTATCGTAAAAGCATATCAAGGAATGACAGGACATATGAAAGGAGAGATTCCTTTTTCTACGTT CGATGAGATGTTTGATGTATATAAACGATCTATTCTTCCTTTAATTGAAGCTGGTAAATTAAAAACGATTTTATTTCAAT ATCCACCATGGTTTGATTGTAAAAAGAAAAATGTAGATTTTCTCCGATATACGAAAGAAAAAATGGAAGGTTTGCCGTGT GCGATAGAATTTCGAAATCAAACATGGTTTTATCCAGAAATGAGAGATAAGACGTTACAGTTTCTAGAGCAGGAGAAATG GATTCATACAATTTGTGATGAGCCACAGGCAGGGATGGGTTCAGTACCGCTCGTATTAGAAGTAACGAGTGCAGAGATGG TGTTAATACGCTTTCATGGCCGGAATGTTCATGGCTGGCTTGATAAAGGAGAAAATTGGAGAGCGGTTCGTTGCTTATAT CGTTATAACAATAAAGAATTAGAAGAATGGGTAGAAAGACTAGAACAATTAAAAAAGAAGACCAAGGACATATATGTACT ATTTAACAATAATTCAGGCGGAGATGCAGCTGATAATGCGAAACAGCTTATGAAAATGATGAACATTACATATGGTGAGC CAAAGCCTGAGCAATTAAATTTGTTTGAGTGA
Upstream 100 bases:
>100_bases AAGCATAAATAAATAACCCCTCAATTTAAAAATTCTTCCATCTAGTATATCATATTTTTATACGAATACTCTTAAAGATG GGACTACTTAATGAAATTGA
Downstream 100 bases:
>100_bases TAATAAACAAGAAAGGCACTGTACAAACAGGGGGAATGTACAGTGCCTTTCTATATGAAAAAGAGGGGTAACAATGTTAC TGAGCGTTTGGTTGATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MVKVFRKWVEWIESEVKKGGIYLLFIGVTGWGDHDSLYIDPYENRNKLRTYSEYFPIVEVDSSFYAMQPERNYTKWAMET PKDFSFIVKAYQGMTGHMKGEIPFSTFDEMFDVYKRSILPLIEAGKLKTILFQYPPWFDCKKKNVDFLRYTKEKMEGLPC AIEFRNQTWFYPEMRDKTLQFLEQEKWIHTICDEPQAGMGSVPLVLEVTSAEMVLIRFHGRNVHGWLDKGENWRAVRCLY RYNNKELEEWVERLEQLKKKTKDIYVLFNNNSGGDAADNAKQLMKMMNITYGEPKPEQLNLFE
Sequences:
>Translated_303_residues MVKVFRKWVEWIESEVKKGGIYLLFIGVTGWGDHDSLYIDPYENRNKLRTYSEYFPIVEVDSSFYAMQPERNYTKWAMET PKDFSFIVKAYQGMTGHMKGEIPFSTFDEMFDVYKRSILPLIEAGKLKTILFQYPPWFDCKKKNVDFLRYTKEKMEGLPC AIEFRNQTWFYPEMRDKTLQFLEQEKWIHTICDEPQAGMGSVPLVLEVTSAEMVLIRFHGRNVHGWLDKGENWRAVRCLY RYNNKELEEWVERLEQLKKKTKDIYVLFNNNSGGDAADNAKQLMKMMNITYGEPKPEQLNLFE >Mature_303_residues MVKVFRKWVEWIESEVKKGGIYLLFIGVTGWGDHDSLYIDPYENRNKLRTYSEYFPIVEVDSSFYAMQPERNYTKWAMET PKDFSFIVKAYQGMTGHMKGEIPFSTFDEMFDVYKRSILPLIEAGKLKTILFQYPPWFDCKKKNVDFLRYTKEKMEGLPC AIEFRNQTWFYPEMRDKTLQFLEQEKWIHTICDEPQAGMGSVPLVLEVTSAEMVLIRFHGRNVHGWLDKGENWRAVRCLY RYNNKELEEWVERLEQLKKKTKDIYVLFNNNSGGDAADNAKQLMKMMNITYGEPKPEQLNLFE
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 36036; Mature: 36036
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVFRKWVEWIESEVKKGGIYLLFIGVTGWGDHDSLYIDPYENRNKLRTYSEYFPIVEV CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHCCEEEE DSSFYAMQPERNYTKWAMETPKDFSFIVKAYQGMTGHMKGEIPFSTFDEMFDVYKRSILP CCCEEEECCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LIEAGKLKTILFQYPPWFDCKKKNVDFLRYTKEKMEGLPCAIEFRNQTWFYPEMRDKTLQ HHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHH FLEQEKWIHTICDEPQAGMGSVPLVLEVTSAEMVLIRFHGRNVHGWLDKGENWRAVRCLY HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEECCCEEEECCCCCCCCEEEEEH RYNNKELEEWVERLEQLKKKTKDIYVLFNNNSGGDAADNAKQLMKMMNITYGEPKPEQLN HCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LFE CCC >Mature Secondary Structure MVKVFRKWVEWIESEVKKGGIYLLFIGVTGWGDHDSLYIDPYENRNKLRTYSEYFPIVEV CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHCCEEEE DSSFYAMQPERNYTKWAMETPKDFSFIVKAYQGMTGHMKGEIPFSTFDEMFDVYKRSILP CCCEEEECCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LIEAGKLKTILFQYPPWFDCKKKNVDFLRYTKEKMEGLPCAIEFRNQTWFYPEMRDKTLQ HHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHH FLEQEKWIHTICDEPQAGMGSVPLVLEVTSAEMVLIRFHGRNVHGWLDKGENWRAVRCLY HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEECCCEEEECCCCCCCCEEEEEH RYNNKELEEWVERLEQLKKKTKDIYVLFNNNSGGDAADNAKQLMKMMNITYGEPKPEQLN HCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LFE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]