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The map label for this gene is oppB [H]

Identifier: 118476761

GI number: 118476761

Start: 1194506

End: 1195468

Strand: Direct

Name: oppB [H]

Synonym: BALH_1043

Alternate gene names: 118476761

Gene position: 1194506-1195468 (Clockwise)

Preceding gene: 118476760

Following gene: 118476762

Centisome position: 22.72

GC content: 37.9

Gene sequence:

>963_bases
TTGCTTTTGAGAAAAACGGGGAGGTGCTTGACTATGGGACGTTATGTATTAAAACGTTTCGTGTACATGGCTTTGACATT
ATTTTTAATTACTACGTTGACTTTCTTTTTGATGAAATTACTTCCAGGTTCTCCGCTTAAAAATCAGGAGAAGTTATCAC
CGGCACAAAAAGAAATCATTCTTGAAAAATATGGTTTAAATGATCCAGTACCAGTTCAATATGCACGTTACTTAGGTAAC
TTAGCAAAAGGTGATTTAGGGGTATCATTCCAATATGATAACCGTCCAGTAACAGATATGATTGTGGATCGCATTGGACC
ATCAGCACAACTTGGTTTACAAGCGATTATATTAGGAACATTTATCGGTTTAATTTTAGGAATCGTTGCGGCACTTCGTA
ACAATACGTGGGTCGATTATGGGGCGACAATTATTTCCGTACTCGGGATGTCGGTACCATCGTTCGTATTCGCCGCATTA
CTACAATATTTCGTAGGGGTAAAACTTGGATGGTTCCCAGTAGCATTCTGGAAAGGACCAGAGTTTACAGTAATGCCTAC
AATCGCTTTATCGATGGCAGTTATCGCAACAATCGCACGTTTCGCTCGTGCAGAGTTAATTGAAGTTATGCAAGCTGACT
ACATTTTAACAGCGAAAGCGAAAGGAATTAGCCAAGGCGTTATCATTATTAAACACGCACTTCGTAACGCGTTAATTCCA
GTTGTAACAATTTTAGGACCAATGGTTGCAGGGTTAATTACAGGTACATTAGTTATTGAGCAAATTTATGCTGTACCAGG
ACTAGGGGAGCAATTCGTTAAATCTATTACAGTGAATGACTATACAGTTATTATGGGAACTACAATTTTCTATAGTGCAA
TCTTCATCTTAGTTATTTTCATTGTTGATATTTTATACGGAATTATTGATCCTCGAATTCGTTTAGCGGGAGGGAAAAAA
TGA

Upstream 100 bases:

>100_bases
AACTAAAAATGGTTTCCATCATGAATAAGGGTATATGCCTATGATGGGCATGTACTCTTATTTTAAAAAAATAAAAGTAA
GAATATTTTAAACTATCTTA

Downstream 100 bases:

>100_bases
TGAAAGATGTACAAAAATTATCTCCAGATTTATTTCAACAAGCCAATCAAAATAATGTGGATAATGAAGTCATTGCCCGT
CCAAGCTTAACGTTTTGGCA

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLLRKTGRCLTMGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVPVQYARYLGN
LAKGDLGVSFQYDNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAALRNNTWVDYGATIISVLGMSVPSFVFAAL
LQYFVGVKLGWFPVAFWKGPEFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIIKHALRNALIP
VVTILGPMVAGLITGTLVIEQIYAVPGLGEQFVKSITVNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDPRIRLAGGKK

Sequences:

>Translated_320_residues
MLLRKTGRCLTMGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVPVQYARYLGN
LAKGDLGVSFQYDNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAALRNNTWVDYGATIISVLGMSVPSFVFAAL
LQYFVGVKLGWFPVAFWKGPEFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIIKHALRNALIP
VVTILGPMVAGLITGTLVIEQIYAVPGLGEQFVKSITVNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDPRIRLAGGKK
>Mature_320_residues
MLLRKTGRCLTMGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVPVQYARYLGN
LAKGDLGVSFQYDNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAALRNNTWVDYGATIISVLGMSVPSFVFAAL
LQYFVGVKLGWFPVAFWKGPEFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIIKHALRNALIP
VVTILGPMVAGLITGTLVIEQIYAVPGLGEQFVKSITVNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDPRIRLAGGKK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=42.2950819672131, Blast_Score=251, Evalue=3e-68,
Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=36.3934426229508, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=31.7507418397626, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=31.5286624203822, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787761, Length=321, Percent_Identity=31.1526479750779, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=26.3736263736264, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=26.3157894736842, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35114; Mature: 35114

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRKTGRCLTMGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEII
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHH
LEKYGLNDPVPVQYARYLGNLAKGDLGVSFQYDNRPVTDMIVDRIGPSAQLGLQAIILGT
HHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH
FIGLILGIVAALRNNTWVDYGATIISVLGMSVPSFVFAALLQYFVGVKLGWFPVAFWKGP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCEEEEEECCC
EFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIIKHALRNALIP
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH
VVTILGPMVAGLITGTLVIEQIYAVPGLGEQFVKSITVNDYTVIMGTTIFYSAIFILVIF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
IVDILYGIIDPRIRLAGGKK
HHHHHHHHHCCCEEECCCCC
>Mature Secondary Structure
MLLRKTGRCLTMGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEII
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHH
LEKYGLNDPVPVQYARYLGNLAKGDLGVSFQYDNRPVTDMIVDRIGPSAQLGLQAIILGT
HHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH
FIGLILGIVAALRNNTWVDYGATIISVLGMSVPSFVFAALLQYFVGVKLGWFPVAFWKGP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCEEEEEECCC
EFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIIKHALRNALIP
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH
VVTILGPMVAGLITGTLVIEQIYAVPGLGEQFVKSITVNDYTVIMGTTIFYSAIFILVIF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
IVDILYGIIDPRIRLAGGKK
HHHHHHHHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]