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The map label for this gene is yhfN [H]

Identifier: 118476711

GI number: 118476711

Start: 1138122

End: 1139438

Strand: Direct

Name: yhfN [H]

Synonym: BALH_0990

Alternate gene names: 118476711

Gene position: 1138122-1139438 (Clockwise)

Preceding gene: 118476710

Following gene: 118476712

Centisome position: 21.65

GC content: 36.37

Gene sequence:

>1317_bases
ATGTACGAACTTACAATAATAATAGACAGGCAGCATAGAGGAGGGAATAGCGTGAGGAAGGTTATTGGGTGGTCGCTTTT
TTTGTACGTTGGATTTGCGTTATTTATATATTGGTATTTATTTGGATGGAGTCATGAACTGATTCCGGACATGTATAAAG
GAACGAGTGCAGATCCAGAAACATTTATGAATGCAAGAGAGCTTACGCTAAGCCAAGATTATTCGCGCGTGAAAAATTTA
TTGTATTTTTTAGCGACGCCTCTTGAATGGATTATATTATTATTTGTACTTGTGCTCGGTATTTCAAAAAAGTTTGAGAA
ATGGTCGAAGGAAACGACGAAAATAAGTGTTCTGCAAGTTGCGATTTATTTCTTTTATTTATCACTACTCACAACAGTTC
TTGCCTTGCCGATGCAATGGATTAGCCGAAAAGTGTCCGTTGATTACGGCATTTCAACGCAAAGTACACAAAGCTGGATA
AAAGATCACGTTATCGGTTTTTGGGAAAGTTATGCGACGATGTTAATTGTAGTTGCCGTTCTGTTATGGCTTATCCGTAA
ATTCCCGAAGAGATGGTGGCTAGCAGGGTGGGCGCTCTCTGTACCATTTACAATCTTTTTAACATTTATACAGCCTGTCG
TTATTGATCCACTTTATAACGACTTTTCGACGCTGAAAAATAAGGAATTAGAAACGAAAATTTTAGCGATAGCAGATAAA
GCGGACATTCCTGCTAAACACGTGTATGAAGTAAATATGTCAGAGAAAACGAATGCGTTAAATGCATATGTAACAGGAAT
TGGCCCTAACGCTCGTATTGTAATGTGGGATACAACGCTTAAGCAATTAAAAGATAAAGAGATTTTATTTATAATGGCTC
ATGAAATGGGGCATTATGTTATGAAACATATATATTGGGGCGTTGCGAGTTATATGTTGCTATCATTTATAGGGATGTAT
CTTATTAGTCGTATTATCAATATGTGTATTCGAAAATGGGGGAATACGCTGCAAATTTCAAAAGCAGCATGTTTTTCAAT
TTTACCTTTATTTTTCTTAATTTCTTCTGTACTCTCTTTTGCATCACAGCCAGCAACAAACTATGTTTCTCGTATAGAAG
AACGAGCGGCAGATCAATATGCTTTAGACATGACGAAAGACGGGAAATCTGGTGTAAAGACGTTTCAATATTTATCAAAA
ACGAGTTTAAGCCAAGTAAATCCGCCTGCGTTAGTAAAGTTTTTCTTATATACACACCCACCAATTTTTGAAAGAATTCA
TGCGTTTGAACAATATGAAAAAGAAAAGAAGCAGTAG

Upstream 100 bases:

>100_bases
TGTCTAAAGGTAGGTAAAACTCTTCTTTATGTAGAAGAGTTTTTTTATGTAAATAGAGGGTTCTTGAGCAATTTGCATAA
TAAGCTTGTTCTAATTTAGC

Downstream 100 bases:

>100_bases
TGTACTGCTTCTTTTCTTTTGGGTTATTCGAATTTTGGAAAATTATAGTGTATAATATATGGAATATTCAGTGAAATGTT
TAGGAGGTTAATATTTTGTT

Product: peptidase

Products: NA

Alternate protein names: PSP23 [H]

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MYELTIIIDRQHRGGNSVRKVIGWSLFLYVGFALFIYWYLFGWSHELIPDMYKGTSADPETFMNARELTLSQDYSRVKNL
LYFLATPLEWIILLFVLVLGISKKFEKWSKETTKISVLQVAIYFFYLSLLTTVLALPMQWISRKVSVDYGISTQSTQSWI
KDHVIGFWESYATMLIVVAVLLWLIRKFPKRWWLAGWALSVPFTIFLTFIQPVVIDPLYNDFSTLKNKELETKILAIADK
ADIPAKHVYEVNMSEKTNALNAYVTGIGPNARIVMWDTTLKQLKDKEILFIMAHEMGHYVMKHIYWGVASYMLLSFIGMY
LISRIINMCIRKWGNTLQISKAACFSILPLFFLISSVLSFASQPATNYVSRIEERAADQYALDMTKDGKSGVKTFQYLSK
TSLSQVNPPALVKFFLYTHPPIFERIHAFEQYEKEKKQ

Sequences:

>Translated_438_residues
MYELTIIIDRQHRGGNSVRKVIGWSLFLYVGFALFIYWYLFGWSHELIPDMYKGTSADPETFMNARELTLSQDYSRVKNL
LYFLATPLEWIILLFVLVLGISKKFEKWSKETTKISVLQVAIYFFYLSLLTTVLALPMQWISRKVSVDYGISTQSTQSWI
KDHVIGFWESYATMLIVVAVLLWLIRKFPKRWWLAGWALSVPFTIFLTFIQPVVIDPLYNDFSTLKNKELETKILAIADK
ADIPAKHVYEVNMSEKTNALNAYVTGIGPNARIVMWDTTLKQLKDKEILFIMAHEMGHYVMKHIYWGVASYMLLSFIGMY
LISRIINMCIRKWGNTLQISKAACFSILPLFFLISSVLSFASQPATNYVSRIEERAADQYALDMTKDGKSGVKTFQYLSK
TSLSQVNPPALVKFFLYTHPPIFERIHAFEQYEKEKKQ
>Mature_438_residues
MYELTIIIDRQHRGGNSVRKVIGWSLFLYVGFALFIYWYLFGWSHELIPDMYKGTSADPETFMNARELTLSQDYSRVKNL
LYFLATPLEWIILLFVLVLGISKKFEKWSKETTKISVLQVAIYFFYLSLLTTVLALPMQWISRKVSVDYGISTQSTQSWI
KDHVIGFWESYATMLIVVAVLLWLIRKFPKRWWLAGWALSVPFTIFLTFIQPVVIDPLYNDFSTLKNKELETKILAIADK
ADIPAKHVYEVNMSEKTNALNAYVTGIGPNARIVMWDTTLKQLKDKEILFIMAHEMGHYVMKHIYWGVASYMLLSFIGMY
LISRIINMCIRKWGNTLQISKAACFSILPLFFLISSVLSFASQPATNYVSRIEERAADQYALDMTKDGKSGVKTFQYLSK
TSLSQVNPPALVKFFLYTHPPIFERIHAFEQYEKEKKQ

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Homo sapiens, GI18379366, Length=429, Percent_Identity=22.6107226107226, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505484, Length=438, Percent_Identity=21.4611872146119, Blast_Score=88, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6322577, Length=319, Percent_Identity=26.9592476489028, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19922414, Length=408, Percent_Identity=19.8529411764706, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 50837; Mature: 50837

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00142 ZINC_PROTEASE ; PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYELTIIIDRQHRGGNSVRKVIGWSLFLYVGFALFIYWYLFGWSHELIPDMYKGTSADPE
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHH
TFMNARELTLSQDYSRVKNLLYFLATPLEWIILLFVLVLGISKKFEKWSKETTKISVLQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYFFYLSLLTTVLALPMQWISRKVSVDYGISTQSTQSWIKDHVIGFWESYATMLIVVAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWLIRKFPKRWWLAGWALSVPFTIFLTFIQPVVIDPLYNDFSTLKNKELETKILAIADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECC
ADIPAKHVYEVNMSEKTNALNAYVTGIGPNARIVMWDTTLKQLKDKEILFIMAHEMGHYV
CCCCHHHEEEECCCCCCCCHHEEEEEECCCCEEEEECCHHHHCCCCCEEEEEHHHHHHHH
MKHIYWGVASYMLLSFIGMYLISRIINMCIRKWGNTLQISKAACFSILPLFFLISSVLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH
ASQPATNYVSRIEERAADQYALDMTKDGKSGVKTFQYLSKTSLSQVNPPALVKFFLYTHP
HCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PIFERIHAFEQYEKEKKQ
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYELTIIIDRQHRGGNSVRKVIGWSLFLYVGFALFIYWYLFGWSHELIPDMYKGTSADPE
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHH
TFMNARELTLSQDYSRVKNLLYFLATPLEWIILLFVLVLGISKKFEKWSKETTKISVLQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYFFYLSLLTTVLALPMQWISRKVSVDYGISTQSTQSWIKDHVIGFWESYATMLIVVAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWLIRKFPKRWWLAGWALSVPFTIFLTFIQPVVIDPLYNDFSTLKNKELETKILAIADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECC
ADIPAKHVYEVNMSEKTNALNAYVTGIGPNARIVMWDTTLKQLKDKEILFIMAHEMGHYV
CCCCHHHEEEECCCCCCCCHHEEEEEECCCCEEEEECCHHHHCCCCCEEEEEHHHHHHHH
MKHIYWGVASYMLLSFIGMYLISRIINMCIRKWGNTLQISKAACFSILPLFFLISSVLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH
ASQPATNYVSRIEERAADQYALDMTKDGKSGVKTFQYLSKTSLSQVNPPALVKFFLYTHP
HCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PIFERIHAFEQYEKEKKQ
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 3145906 [H]