| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ydbT [H]
Identifier: 118476662
GI number: 118476662
Start: 1073863
End: 1075323
Strand: Direct
Name: ydbT [H]
Synonym: BALH_0940
Alternate gene names: 118476662
Gene position: 1073863-1075323 (Clockwise)
Preceding gene: 118476661
Following gene: 118476663
Centisome position: 20.43
GC content: 37.37
Gene sequence:
>1461_bases GTGATGAGGATGTATAAGAGACAGCATCCGATCACGATGTTATTGGAATTAAAAATAAGAGATTTTATACCACTCTTTAT TTTCATGTTTAGCTTAAATGGAAAATTCCCGTTTTGGTACTTAATTCCCGCTGCATTTGGTTTACTCACTGTCTTTTCAG CGTTTGAAAAATGGTATTACACAACATATTGGGTTGAAAATAACGTATTACATGTGAAACAAGGTCTCTTTGTGAAGAAG GAGAGCTACTTAAATAAAGAACGTGTTCAAACAATCAATACAAGCTCTAACGTGTTATATCAAATGCTTGGCTTAAAGAA AATCCAAATTGAAACAGCTGGCGGGGGCGATGATGCGGAGGTTAGCTTAGCCGGTATTACAGTAGAAGAGGCAACTGAGC TTATTGCTTTGCTAAATGAGCCAACTCCAGAAGTGAAAGCAGAAGGAACGCTAGACGAAAAAGCGGAACATGCAGTAGAA AAAGAAATCGTTACAGAAGAAAAACAAACGACAGAATATAAATTGACTTGGAAAGAAATTTTACTAGCCTCTGTTACATC GGGGCAGTTTGGACTATTATTCTCGTTAATCTTTTTCGTGTATCACCAAGTAGAGGAGTACATTCCGAAATGGATAGAGA ATAGCGTAAAGTCATATGTAATGCAACATGATATATATGGCTGGATTTTCATGGTAGTTATTTTGCTCGTCCTTTCGTGG ATTATATCTACAATCGGTTATGCGCTAAAACATGGAGATTTCACAGTAAATCGAAGAAATGACGAAGTCCGCATTTCACA AGGATTACTTGAGAAAAAAGAACTCGTCCTAAAGTTACATCGTATTCAAGGGATTACGATAAAAGAAAGTATTTTACGTC AGCCATTCGGTTATTGTGCTGTGCAAGTAGAAGTGATTCAAAGTAAGGAAACGGATGATGAAAAAGAAAAAGTTACACTG CATCCAATCATTCGAAAAGATCGAGTACAGCAGTTACTCGCGCATTTACAACTACCATACGAACTGAATACAAATATTAT TTCATTACCAAAAGCAGCATTACGCCGCTATCTCATTGATAGCTTCATCTTTTTCGCAATGATAGCTATCCCGCTTATTG GAATAAGTATATACTTTGAAAAGCACTTCATCATGTGGGCACTAATTCCGCTCACGATCCTCATCTTTACACTTGGTTAC GCAACATTTAAAACAAATGGTTACAGTGTAAACGGAGAGCAAATTACACTTGTATATCGTAGCGTCGGAAAATATACAGG ACTTATTAGAAGAAGACACGTCCAATCGATGGAAAAGACGCAATCCTATTTCCAGCGCCGCGCGGATTTATGTACGTATA AGTTTTCGAGCGCATCATCGAGTTATAAATTAGAGCATACGAGAATAGAAGATGCGGAGAGAATGCAGGATTGGTATAAG AAGAGGTTAAGTGAGAATTAA
Upstream 100 bases:
>100_bases TTACACATTTCAACAGCAGCAACTTCTCACAGCATCCCAGGCTTAACGATGTATGAAGCAGAAATGTTGAAAACGAAAAT CGCAGAATTAGCGAAAGTGA
Downstream 100 bases:
>100_bases GTGGAATGGCTCGTCTTTTGCGGAAGGCGGGCTGTTTTTTATGTGAAAATAATGAATAATATATGTGGAAGGAAAAGTGA GGTCAATGAGAGTGAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MMRMYKRQHPITMLLELKIRDFIPLFIFMFSLNGKFPFWYLIPAAFGLLTVFSAFEKWYYTTYWVENNVLHVKQGLFVKK ESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAVE KEIVTEEKQTTEYKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVVILLVLSW IISTIGYALKHGDFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKETDDEKEKVTL HPIIRKDRVQQLLAHLQLPYELNTNIISLPKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGY ATFKTNGYSVNGEQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRIEDAERMQDWYK KRLSEN
Sequences:
>Translated_486_residues MMRMYKRQHPITMLLELKIRDFIPLFIFMFSLNGKFPFWYLIPAAFGLLTVFSAFEKWYYTTYWVENNVLHVKQGLFVKK ESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAVE KEIVTEEKQTTEYKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVVILLVLSW IISTIGYALKHGDFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKETDDEKEKVTL HPIIRKDRVQQLLAHLQLPYELNTNIISLPKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGY ATFKTNGYSVNGEQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRIEDAERMQDWYK KRLSEN >Mature_486_residues MMRMYKRQHPITMLLELKIRDFIPLFIFMFSLNGKFPFWYLIPAAFGLLTVFSAFEKWYYTTYWVENNVLHVKQGLFVKK ESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAVE KEIVTEEKQTTEYKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVVILLVLSW IISTIGYALKHGDFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKETDDEKEKVTL HPIIRKDRVQQLLAHLQLPYELNTNIISLPKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGY ATFKTNGYSVNGEQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRIEDAERMQDWYK KRLSEN
Specific function: Unknown
COG id: COG3428
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0699 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005182 - InterPro: IPR014529 [H]
Pfam domain/function: PF03703 DUF304 [H]
EC number: NA
Molecular weight: Translated: 56699; Mature: 56699
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRMYKRQHPITMLLELKIRDFIPLFIFMFSLNGKFPFWYLIPAAFGLLTVFSAFEKWYY CCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEE TTYWVENNVLHVKQGLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGDDAE EEEEEECCEEEECCCCEEEHHHHCCHHHHHEECCHHHHHHHHHCCEEEEEEECCCCCCCE VSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAVEKEIVTEEKQTTEYKLTWKEI EEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCEEEEHHHH LLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVVILLVLSW HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IISTIGYALKHGDFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCA HHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCHHE VQVEVIQSKETDDEKEKVTLHPIIRKDRVQQLLAHLQLPYELNTNIISLPKAALRRYLID EEEEEECCCCCCCCHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH SFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNGEQITLVYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCEEEEEEH SVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRIEDAERMQDWYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEHHHHHHHHHHHHHHH KRLSEN HHHCCC >Mature Secondary Structure MMRMYKRQHPITMLLELKIRDFIPLFIFMFSLNGKFPFWYLIPAAFGLLTVFSAFEKWYY CCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEE TTYWVENNVLHVKQGLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGDDAE EEEEEECCEEEECCCCEEEHHHHCCHHHHHEECCHHHHHHHHHCCEEEEEEECCCCCCCE VSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAVEKEIVTEEKQTTEYKLTWKEI EEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCEEEEHHHH LLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVVILLVLSW HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IISTIGYALKHGDFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCA HHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCHHE VQVEVIQSKETDDEKEKVTLHPIIRKDRVQQLLAHLQLPYELNTNIISLPKAALRRYLID EEEEEECCCCCCCCHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH SFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNGEQITLVYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCEEEEEEH SVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRIEDAERMQDWYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEHHHHHHHHHHHHHHH KRLSEN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]