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The map label for this gene is ydfH [H]

Identifier: 118476624

GI number: 118476624

Start: 1028892

End: 1030109

Strand: Direct

Name: ydfH [H]

Synonym: BALH_0899

Alternate gene names: 118476624

Gene position: 1028892-1030109 (Clockwise)

Preceding gene: 118476622

Following gene: 118476625

Centisome position: 19.57

GC content: 32.59

Gene sequence:

>1218_bases
ATGAAAAAAATGAATTCAAATATAGACGTGGATACAAATGTATTGGAAGCGGTATTTATTCCAAGAAGGTTTATTGTTTT
ATGGATTACACTCGTATATATAGCTTCAATGCTTTTAGAATTTCGTAATAATATTCTCTCAATGGATAGTTTCTTCTTCA
CAATAATTATTGTTATTCATACTATCTTTCATTGGTATGCAAGTTCATTAAAGAATAGACAATTGTTGTATTTCTTTTTT
GTACAACTCTTCATTGTGTTTCTTGCTGCATTTATTGTACCAAATGGTTCAATAGCTATTTTTGTTGGATTAACGCCTAT
TTTAATTGCCCAAAGTTTATATGTTTATAACAATATATTTAAAGTAATGGCAGTTTTTACTCTTATGTATGCCATATTTT
GTATTGCGATTAGTATGAATTATGGTGTGAATAAAGTAGCTATTCTTATCTCTATGTTCCTTTTAGTACTAGCAATTATT
ATTCCTTTTTCTTATATTAATAAGCAGCAATATGATGCACGTAATCGTATACAGAGCTACATTCAAGAGTTAGAGTCTGC
ATATATGAGAGTAGAAGAATTGACATTAGCTAATGAAAGGCAGCGAATGGCAAGGGATTTACATGATACGTTAGCGCAAG
GTGTAGCGAGCTTAATTATGCAATTGGAAGCAATAGACGCCCATATGCAAAAAGGGAATACAAGGCGATCTCAAGAGATT
ATGAAACAAACTATGATAAGAGCGAGACAAACTTTACATGACGCAAGGCTGGTTATTGATGATTTGCGTCATACTACTAA
TTCATTTAATAAAGCTGTAGAGGAAGAAGTTCAACGTTTTTCTGAGGCTACGTCTATACATGTGAGGTTTACTATTCAAA
GCCCCCCGCATATTTCAAGTTTAGTAAAGGAACATTGTTTATATGTAATTAGTGAATGTTTAACGAATATCGCAAAACAT
TCGCAGGCAACAGATGTACATTTGAAAGTTGAATATAGCGGTAGCCTTGAAAGACTTACTATTGAAGTTGAAGATAATGG
AATTGGTTTTGACACTGGATATATCGGTAAGAATCCTGGACATTACGGCTTAATTGGCTTAAATGAGCGAGTTCGATTGA
TTAATGGAGAAATACATATATTGAGTGAAAAGGTGAAGGGTACGAAAGTGTGTATTCAAGTACCTATCAATAATGAAGGA
GATAGCGATGAAGTATAA

Upstream 100 bases:

>100_bases
TATATTCTGTAATGGGGATGGGAAAAAGCCCCACTAATTAAAGTTTCACTTTATCAAAATGTAAGCTGCATCTTGTATAA
TATAATGGTGGAGGTCGAAT

Downstream 100 bases:

>100_bases
CGTATTAATTGTGGATGATCATTTCGTTGTAAGAGAAGGTCTGAAATTAATAATAGAAACGAGTGATTCATTTCAAATTA
TAGGTGAGGCTGAAAATGGA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKKMNSNIDVDTNVLEAVFIPRRFIVLWITLVYIASMLLEFRNNILSMDSFFFTIIIVIHTIFHWYASSLKNRQLLYFFF
VQLFIVFLAAFIVPNGSIAIFVGLTPILIAQSLYVYNNIFKVMAVFTLMYAIFCIAISMNYGVNKVAILISMFLLVLAII
IPFSYINKQQYDARNRIQSYIQELESAYMRVEELTLANERQRMARDLHDTLAQGVASLIMQLEAIDAHMQKGNTRRSQEI
MKQTMIRARQTLHDARLVIDDLRHTTNSFNKAVEEEVQRFSEATSIHVRFTIQSPPHISSLVKEHCLYVISECLTNIAKH
SQATDVHLKVEYSGSLERLTIEVEDNGIGFDTGYIGKNPGHYGLIGLNERVRLINGEIHILSEKVKGTKVCIQVPINNEG
DSDEV

Sequences:

>Translated_405_residues
MKKMNSNIDVDTNVLEAVFIPRRFIVLWITLVYIASMLLEFRNNILSMDSFFFTIIIVIHTIFHWYASSLKNRQLLYFFF
VQLFIVFLAAFIVPNGSIAIFVGLTPILIAQSLYVYNNIFKVMAVFTLMYAIFCIAISMNYGVNKVAILISMFLLVLAII
IPFSYINKQQYDARNRIQSYIQELESAYMRVEELTLANERQRMARDLHDTLAQGVASLIMQLEAIDAHMQKGNTRRSQEI
MKQTMIRARQTLHDARLVIDDLRHTTNSFNKAVEEEVQRFSEATSIHVRFTIQSPPHISSLVKEHCLYVISECLTNIAKH
SQATDVHLKVEYSGSLERLTIEVEDNGIGFDTGYIGKNPGHYGLIGLNERVRLINGEIHILSEKVKGTKVCIQVPINNEG
DSDEV
>Mature_405_residues
MKKMNSNIDVDTNVLEAVFIPRRFIVLWITLVYIASMLLEFRNNILSMDSFFFTIIIVIHTIFHWYASSLKNRQLLYFFF
VQLFIVFLAAFIVPNGSIAIFVGLTPILIAQSLYVYNNIFKVMAVFTLMYAIFCIAISMNYGVNKVAILISMFLLVLAII
IPFSYINKQQYDARNRIQSYIQELESAYMRVEELTLANERQRMARDLHDTLAQGVASLIMQLEAIDAHMQKGNTRRSQEI
MKQTMIRARQTLHDARLVIDDLRHTTNSFNKAVEEEVQRFSEATSIHVRFTIQSPPHISSLVKEHCLYVISECLTNIAKH
SQATDVHLKVEYSGSLERLTIEVEDNGIGFDTGYIGKNPGHYGLIGLNERVRLINGEIHILSEKVKGTKVCIQVPINNEG
DSDEV

Specific function: Member of the two-component regulatory system ydfH/ydfI. May activate ydfI by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1787474, Length=229, Percent_Identity=28.3842794759825, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788812, Length=208, Percent_Identity=27.8846153846154, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46385; Mature: 46385

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMNSNIDVDTNVLEAVFIPRRFIVLWITLVYIASMLLEFRNNILSMDSFFFTIIIVIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIFHWYASSLKNRQLLYFFFVQLFIVFLAAFIVPNGSIAIFVGLTPILIAQSLYVYNNIF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
KVMAVFTLMYAIFCIAISMNYGVNKVAILISMFLLVLAIIIPFSYINKQQYDARNRIQSY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
IQELESAYMRVEELTLANERQRMARDLHDTLAQGVASLIMQLEAIDAHMQKGNTRRSQEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MKQTMIRARQTLHDARLVIDDLRHTTNSFNKAVEEEVQRFSEATSIHVRFTIQSPPHISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHH
LVKEHCLYVISECLTNIAKHSQATDVHLKVEYSGSLERLTIEVEDNGIGFDTGYIGKNPG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCC
HYGLIGLNERVRLINGEIHILSEKVKGTKVCIQVPINNEGDSDEV
CEEEEECCCCEEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKKMNSNIDVDTNVLEAVFIPRRFIVLWITLVYIASMLLEFRNNILSMDSFFFTIIIVIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIFHWYASSLKNRQLLYFFFVQLFIVFLAAFIVPNGSIAIFVGLTPILIAQSLYVYNNIF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
KVMAVFTLMYAIFCIAISMNYGVNKVAILISMFLLVLAIIIPFSYINKQQYDARNRIQSY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
IQELESAYMRVEELTLANERQRMARDLHDTLAQGVASLIMQLEAIDAHMQKGNTRRSQEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MKQTMIRARQTLHDARLVIDDLRHTTNSFNKAVEEEVQRFSEATSIHVRFTIQSPPHISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHH
LVKEHCLYVISECLTNIAKHSQATDVHLKVEYSGSLERLTIEVEDNGIGFDTGYIGKNPG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCC
HYGLIGLNERVRLINGEIHILSEKVKGTKVCIQVPINNEGDSDEV
CEEEEECCCCEEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]