| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is oppD [H]
Identifier: 118476548
GI number: 118476548
Start: 938118
End: 939128
Strand: Direct
Name: oppD [H]
Synonym: BALH_0819
Alternate gene names: 118476548
Gene position: 938118-939128 (Clockwise)
Preceding gene: 118476547
Following gene: 118476549
Centisome position: 17.84
GC content: 41.64
Gene sequence:
>1011_bases GTGAAGGGAGTGAGAAGCGTGTCTGAAAAACTACTAGAAGTGAAAAATTTAAAGACTTCTTTTTTCATAGAAAGTGGAGA AGTGGAAGCCGTTCGCGGCGTTACATTTCGTTTAAATAAAGGAGAAGTAGTTGGTATCGTTGGGGAATCCGGAAGCGGAA AGAGTGTAATGGCGAAGTCCGTGATGTCTCTCGTTACGTCACCAGGGAAAGTGAAAGAAGGAGAGATTCTTTTTCATAAT GAAAATATCCTTTCTAAATCTGAAAAAGAATTACGTTCTATTAGAGGAAATCAAATTTCATTGATCTCCCAAGATCCAAT GTCGGCGCTAAATCCAGTTGTGAAAATTGGGAAGCAAATGACGGAAGTAATTATACGGCATCAAAAAGTAAAAAAGAAAG AAGCAGAGCAGATTGCGGTTAACTTACTAAAACAAGTCGGTCTTTCGTCGCCAGAAGAAAGGGTAAAACAATATCCGCAC GAACTAAGCGGTGGTATGAAGCAGCGGGTTATGATCGCAATGGCGATGTCTTGTAACCCAGACCTTCTCATTGCGGACGA ACCGACAACAGCACTTGATGTAACGATACAAGCACAAATACTAGATTTAATGAAAAACTTAAAAAATGAAACGAACATGG CGTTACTTCTTATTACGCATGACTTAGGAATAGTCGCGCAAAACTGTACACGCGTTATCGTTATGTATGGCGGGCTTATT ATGGAAGAAGGACCTGTACTTGATATTTTCCAATCACCGAATCATCCATATACGAAAGGGCTATTAAACTCTTTGCCAAA AATATCGAACGGCGTAAAAGAAAGACTTGCGCCAATTCAAGGTGTAACGCCAAATTTATTACACCCGCCGAAAGGTTGCC CATTCGCAGAGCGTTGCCCGCATGCGATGGACATTTGTGAAAAAGAACGGCCGCCATATTTTGAAATCGGAGACGGAAGG CGTTCCATGTGCTGGTTAAATGATAGGGCGGTAGGTGATTCCCATGCATGA
Upstream 100 bases:
>100_bases TCCTTATCCTTTTAACGGTACTAAGTTTTAACGTAATTGGTGAAGCATTGAAGAAAGCTTTCGCACCAAAAGGAGCTGGA AATGAAAACTAAAGTGTTAA
Downstream 100 bases:
>100_bases AGAAAACTTAATTGAAGTTCGGAACTTAAAAAAGTATTTTCCTATTAAAAAAGGACTATTCGGCAGAAAAACAGAGCAAT TAAAAGCAGTCGATGATTTA
Product: oligopeptide ABC transporter ATP-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: Stage 0 sporulation protein KD [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKGVRSVSEKLLEVKNLKTSFFIESGEVEAVRGVTFRLNKGEVVGIVGESGSGKSVMAKSVMSLVTSPGKVKEGEILFHN ENILSKSEKELRSIRGNQISLISQDPMSALNPVVKIGKQMTEVIIRHQKVKKKEAEQIAVNLLKQVGLSSPEERVKQYPH ELSGGMKQRVMIAMAMSCNPDLLIADEPTTALDVTIQAQILDLMKNLKNETNMALLLITHDLGIVAQNCTRVIVMYGGLI MEEGPVLDIFQSPNHPYTKGLLNSLPKISNGVKERLAPIQGVTPNLLHPPKGCPFAERCPHAMDICEKERPPYFEIGDGR RSMCWLNDRAVGDSHA
Sequences:
>Translated_336_residues MKGVRSVSEKLLEVKNLKTSFFIESGEVEAVRGVTFRLNKGEVVGIVGESGSGKSVMAKSVMSLVTSPGKVKEGEILFHN ENILSKSEKELRSIRGNQISLISQDPMSALNPVVKIGKQMTEVIIRHQKVKKKEAEQIAVNLLKQVGLSSPEERVKQYPH ELSGGMKQRVMIAMAMSCNPDLLIADEPTTALDVTIQAQILDLMKNLKNETNMALLLITHDLGIVAQNCTRVIVMYGGLI MEEGPVLDIFQSPNHPYTKGLLNSLPKISNGVKERLAPIQGVTPNLLHPPKGCPFAERCPHAMDICEKERPPYFEIGDGR RSMCWLNDRAVGDSHA >Mature_336_residues MKGVRSVSEKLLEVKNLKTSFFIESGEVEAVRGVTFRLNKGEVVGIVGESGSGKSVMAKSVMSLVTSPGKVKEGEILFHN ENILSKSEKELRSIRGNQISLISQDPMSALNPVVKIGKQMTEVIIRHQKVKKKEAEQIAVNLLKQVGLSSPEERVKQYPH ELSGGMKQRVMIAMAMSCNPDLLIADEPTTALDVTIQAQILDLMKNLKNETNMALLLITHDLGIVAQNCTRVIVMYGGLI MEEGPVLDIFQSPNHPYTKGLLNSLPKISNGVKERLAPIQGVTPNLLHPPKGCPFAERCPHAMDICEKERPPYFEIGDGR RSMCWLNDRAVGDSHA
Specific function: Part of the binding protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system. Required for sporulation and competence [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9665248, Length=225, Percent_Identity=28.4444444444444, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI6005701, Length=210, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI27436953, Length=195, Percent_Identity=24.6153846153846, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI42741659, Length=237, Percent_Identity=28.2700421940928, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI27477115, Length=210, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI153792144, Length=210, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI9955968, Length=220, Percent_Identity=29.0909090909091, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI9955966, Length=220, Percent_Identity=29.0909090909091, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI45243524, Length=220, Percent_Identity=29.0909090909091, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI42490749, Length=261, Percent_Identity=26.0536398467433, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI9961252, Length=220, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI4505771, Length=223, Percent_Identity=27.8026905829596, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI9961250, Length=223, Percent_Identity=27.8026905829596, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI148612844, Length=227, Percent_Identity=27.7533039647577, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI255708477, Length=227, Percent_Identity=27.7533039647577, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI48994883, Length=318, Percent_Identity=49.3710691823899, Blast_Score=315, Evalue=2e-87, Organism=Escherichia coli, GI1789963, Length=314, Percent_Identity=49.0445859872611, Blast_Score=310, Evalue=1e-85, Organism=Escherichia coli, GI1787759, Length=328, Percent_Identity=44.8170731707317, Blast_Score=284, Evalue=5e-78, Organism=Escherichia coli, GI145693107, Length=290, Percent_Identity=44.1379310344828, Blast_Score=244, Evalue=5e-66, Organism=Escherichia coli, GI1788506, Length=261, Percent_Identity=45.5938697318008, Blast_Score=234, Evalue=6e-63, Organism=Escherichia coli, GI1787500, Length=324, Percent_Identity=37.962962962963, Blast_Score=214, Evalue=5e-57, Organism=Escherichia coli, GI1789962, Length=330, Percent_Identity=32.4242424242424, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1787548, Length=304, Percent_Identity=35.1973684210526, Blast_Score=200, Evalue=9e-53, Organism=Escherichia coli, GI1787758, Length=326, Percent_Identity=33.4355828220859, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI48994997, Length=259, Percent_Identity=33.976833976834, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=36.7521367521368, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1787547, Length=259, Percent_Identity=31.6602316602317, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1786398, Length=254, Percent_Identity=30.7086614173228, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788225, Length=258, Percent_Identity=31.3953488372093, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789891, Length=209, Percent_Identity=35.4066985645933, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1789032, Length=274, Percent_Identity=29.5620437956204, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=31.7796610169492, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1786872, Length=215, Percent_Identity=33.953488372093, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786703, Length=236, Percent_Identity=30.9322033898305, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787089, Length=238, Percent_Identity=31.0924369747899, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789672, Length=244, Percent_Identity=28.6885245901639, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788644, Length=265, Percent_Identity=32.0754716981132, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787105, Length=240, Percent_Identity=30, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI87081834, Length=241, Percent_Identity=31.9502074688797, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787370, Length=248, Percent_Identity=27.4193548387097, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1790162, Length=245, Percent_Identity=26.9387755102041, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87081791, Length=290, Percent_Identity=27.5862068965517, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787712, Length=256, Percent_Identity=28.125, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789873, Length=213, Percent_Identity=30.0469483568075, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788450, Length=234, Percent_Identity=27.7777777777778, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786563, Length=232, Percent_Identity=29.3103448275862, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788761, Length=264, Percent_Identity=23.8636363636364, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081709, Length=258, Percent_Identity=26.3565891472868, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87082267, Length=240, Percent_Identity=25.8333333333333, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786345, Length=239, Percent_Identity=26.7782426778243, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789991, Length=270, Percent_Identity=30, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787143, Length=258, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1787792, Length=214, Percent_Identity=29.4392523364486, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=25.6637168141593, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786319, Length=231, Percent_Identity=29.4372294372294, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787112, Length=241, Percent_Identity=29.045643153527, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI48994943, Length=237, Percent_Identity=25.7383966244726, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786698, Length=198, Percent_Identity=28.2828282828283, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=27.8301886792453, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790739, Length=258, Percent_Identity=24.031007751938, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788165, Length=227, Percent_Identity=24.2290748898678, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790467, Length=244, Percent_Identity=24.1803278688525, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=24.896265560166, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790544, Length=246, Percent_Identity=25.2032520325203, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787164, Length=215, Percent_Identity=29.7674418604651, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789864, Length=268, Percent_Identity=25.3731343283582, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787041, Length=222, Percent_Identity=24.7747747747748, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786253, Length=225, Percent_Identity=25.3333333333333, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=24.6511627906977, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789586, Length=189, Percent_Identity=26.4550264550265, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193209708, Length=218, Percent_Identity=33.0275229357798, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25146777, Length=223, Percent_Identity=29.5964125560538, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI193211015, Length=236, Percent_Identity=25.8474576271186, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71996809, Length=237, Percent_Identity=26.5822784810127, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193211017, Length=237, Percent_Identity=26.5822784810127, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115534520, Length=310, Percent_Identity=26.1290322580645, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17569143, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71984940, Length=185, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17558664, Length=221, Percent_Identity=28.0542986425339, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=26.3392857142857, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17541710, Length=235, Percent_Identity=28.0851063829787, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI212646699, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17567265, Length=212, Percent_Identity=26.8867924528302, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI19920532, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24580930, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI116007328, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI28574150, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641565, Length=220, Percent_Identity=30.9090909090909, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI85726357, Length=269, Percent_Identity=26.0223048327138, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17136662, Length=232, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24659289, Length=225, Percent_Identity=28.4444444444444, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI28574533, Length=221, Percent_Identity=26.6968325791855, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 36985; Mature: 36985
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVRSVSEKLLEVKNLKTSFFIESGEVEAVRGVTFRLNKGEVVGIVGESGSGKSVMAKS CCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECEEEEECCCCEEEEEECCCCCHHHHHHH VMSLVTSPGKVKEGEILFHNENILSKSEKELRSIRGNQISLISQDPMSALNPVVKIGKQM HHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH TEVIIRHQKVKKKEAEQIAVNLLKQVGLSSPEERVKQYPHELSGGMKQRVMIAMAMSCNP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCHHHHHHHHHEECCCC DLLIADEPTTALDVTIQAQILDLMKNLKNETNMALLLITHDLGIVAQNCTRVIVMYGGLI CEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEE MEEGPVLDIFQSPNHPYTKGLLNSLPKISNGVKERLAPIQGVTPNLLHPPKGCPFAERCP ECCCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC HAMDICEKERPPYFEIGDGRRSMCWLNDRAVGDSHA HHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MKGVRSVSEKLLEVKNLKTSFFIESGEVEAVRGVTFRLNKGEVVGIVGESGSGKSVMAKS CCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECEEEEECCCCEEEEEECCCCCHHHHHHH VMSLVTSPGKVKEGEILFHNENILSKSEKELRSIRGNQISLISQDPMSALNPVVKIGKQM HHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH TEVIIRHQKVKKKEAEQIAVNLLKQVGLSSPEERVKQYPHELSGGMKQRVMIAMAMSCNP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCHHHHHHHHHEECCCC DLLIADEPTTALDVTIQAQILDLMKNLKNETNMALLLITHDLGIVAQNCTRVIVMYGGLI CEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEE MEEGPVLDIFQSPNHPYTKGLLNSLPKISNGVKERLAPIQGVTPNLLHPPKGCPFAERCP ECCCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC HAMDICEKERPPYFEIGDGRRSMCWLNDRAVGDSHA HHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1901616; 1899858; 9384377 [H]