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The map label for this gene is ocd2 [H]

Identifier: 118476543

GI number: 118476543

Start: 933123

End: 934100

Strand: Direct

Name: ocd2 [H]

Synonym: BALH_0814

Alternate gene names: 118476543

Gene position: 933123-934100 (Clockwise)

Preceding gene: 118476542

Following gene: 118476545

Centisome position: 17.75

GC content: 42.23

Gene sequence:

>978_bases
ATGCTAGTCATAAGCGCGAAAGAACAAAGAGACTTAGTAAATATGAACGAAGTCATTGAATACGCAGCGCTTGCTTTAAA
AGAATTTTCCGCAGAAAGAACGATTACACCAATACGCGGCTCATTACCTTTTGCGAACGAGAAAAATACGGCCTTAATTA
TGCCTTCAGTAGCGGAAGGACTTGAGGCACTTGGCTTAAAAGTAGTAACAGTAGTCCCCGAGAACAAAAAGGTAGGAAAG
AAAACGATAAACGGGATTGTGATGCTATCAGACTTTCAAACGGGAGAACCGCTCGCACTTTTAGAAGGATCCTACTTAAC
GATGATTCGAACAGGCGCCCTATCAGGAGTAGCGACAAAACATTTAGCTCGTCATAACGCAAAAACTTTATGTATCATCG
GGACAGGAGAACAGGCGAAGGGAATTGCAGAAGCAGTATTTGCGGTTAGAAATATTGAAAAAGTCATTTTATACAATCGA
ACAGAAGAAAAAGCGTATGCATTCTCGCAATATATACAAGAGAGATTCAATAAACCTGCCTATGTTCACACAAATGCAAA
TGAAGCAATAAGCGAAGCAGACATTATCGTCACAACTACGAACGCTTCCACACCAGTCTTCTCAGAAAAACTACAAAAAG
GCGTCCACATAAACGCCGTCGGCTCATTTAGGCCGAACATGCAAGAATTACCATCTCACGCCATCGCTAATGCAAATAAA
GTAGTAGTCGAATCAAAAGAGGCAGCACTAGAAGAAACAGGTGACCTTCAAGTTCCAGTGCGAGAAGGTCTATTTGAGGC
GAGCGCCATTCACGCTGAACTCGGACAAATTATAAGCGGTGAAAGAGCTGGCCGTGAAAATGATGAAGAGATTACTATTT
TTAAATCGGTTGGTTTGGCAGTAGTGGATATTATCGTTGCGAAGTATTTGTATGAGAAAGCGGTGGAGCGCGGGGTTGGG
AGTAGGATTGAGTTTTGA

Upstream 100 bases:

>100_bases
GGGCATGCTTTTATTACAGGATTTCATCAATTCGTTGTAGACCCGAGAGATGATTTGAACCGGGGATTTTTGTTAGGATA
AAGGGAGGAGGTGGAAAGAT

Downstream 100 bases:

>100_bases
TTGAGGGGCTGCCTTTTGGTGGTCTTTTTTGTTTGGGTTGAGGGGTAATAAATAAGGGGAGAGGAATTCTCCCCTTATTT
ATTATGCATGCAATGTGAAT

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLVISAKEQRDLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEKNTALIMPSVAEGLEALGLKVVTVVPENKKVGK
KTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATKHLARHNAKTLCIIGTGEQAKGIAEAVFAVRNIEKVILYNR
TEEKAYAFSQYIQERFNKPAYVHTNANEAISEADIIVTTTNASTPVFSEKLQKGVHINAVGSFRPNMQELPSHAIANANK
VVVESKEAALEETGDLQVPVREGLFEASAIHAELGQIISGERAGRENDEEITIFKSVGLAVVDIIVAKYLYEKAVERGVG
SRIEF

Sequences:

>Translated_325_residues
MLVISAKEQRDLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEKNTALIMPSVAEGLEALGLKVVTVVPENKKVGK
KTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATKHLARHNAKTLCIIGTGEQAKGIAEAVFAVRNIEKVILYNR
TEEKAYAFSQYIQERFNKPAYVHTNANEAISEADIIVTTTNASTPVFSEKLQKGVHINAVGSFRPNMQELPSHAIANANK
VVVESKEAALEETGDLQVPVREGLFEASAIHAELGQIISGERAGRENDEEITIFKSVGLAVVDIIVAKYLYEKAVERGVG
SRIEF
>Mature_325_residues
MLVISAKEQRDLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEKNTALIMPSVAEGLEALGLKVVTVVPENKKVGK
KTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATKHLARHNAKTLCIIGTGEQAKGIAEAVFAVRNIEKVILYNR
TEEKAYAFSQYIQERFNKPAYVHTNANEAISEADIIVTTTNASTPVFSEKLQKGVHINAVGSFRPNMQELPSHAIANANK
VVVESKEAALEETGDLQVPVREGLFEASAIHAELGQIISGERAGRENDEEITIFKSVGLAVVDIIVAKYLYEKAVERGVG
SRIEF

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=288, Percent_Identity=33.6805555555556, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI4503065, Length=281, Percent_Identity=33.8078291814947, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24642678, Length=333, Percent_Identity=30.03003003003, Blast_Score=92, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 35338; Mature: 35338

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVISAKEQRDLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEKNTALIMPSVAEG
CEEECCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHH
LEALGLKVVTVVPENKKVGKKTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATK
HHHCCEEEEEEECCCCHHCHHHHCEEEEEECCCCCCCEEEECCCEEEEEECCCHHHHHHH
HLARHNAKTLCIIGTGEQAKGIAEAVFAVRNIEKVILYNRTEEKAYAFSQYIQERFNKPA
HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCE
YVHTNANEAISEADIIVTTTNASTPVFSEKLQKGVHINAVGSFRPNMQELPSHAIANANK
EEECCCHHHHCCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCHHHCCHHHHCCCCE
VVVESKEAALEETGDLQVPVREGLFEASAIHAELGQIISGERAGRENDEEITIFKSVGLA
EEEECHHHHHHHCCCEEECHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH
VVDIIVAKYLYEKAVERGVGSRIEF
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLVISAKEQRDLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEKNTALIMPSVAEG
CEEECCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHH
LEALGLKVVTVVPENKKVGKKTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATK
HHHCCEEEEEEECCCCHHCHHHHCEEEEEECCCCCCCEEEECCCEEEEEECCCHHHHHHH
HLARHNAKTLCIIGTGEQAKGIAEAVFAVRNIEKVILYNRTEEKAYAFSQYIQERFNKPA
HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCE
YVHTNANEAISEADIIVTTTNASTPVFSEKLQKGVHINAVGSFRPNMQELPSHAIANANK
EEECCCHHHHCCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCHHHCCHHHHCCCCE
VVVESKEAALEETGDLQVPVREGLFEASAIHAELGQIISGERAGRENDEEITIFKSVGLA
EEEECHHHHHHHCCCEEECHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH
VVDIIVAKYLYEKAVERGVGSRIEF
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]